Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
TPM4P67936 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TPM4P67936 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TPM4P67936 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
TPM4P67936 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TPM4P67936 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.06■□□□□ 0.96
TPM4P67936 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.06■□□□□ 0.96
TPM4P67936 DUSP5P2-201ENST00000426873 1033 ntBASIC21.06■□□□□ 0.96
TPM4P67936 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TPM4P67936 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.06■□□□□ 0.96
TPM4P67936 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
TPM4P67936 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TPM4P67936 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TPM4P67936 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.06■□□□□ 0.96
TPM4P67936 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
TPM4P67936 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.06■□□□□ 0.96
TPM4P67936 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPM4P67936 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPM4P67936 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.05■□□□□ 0.96
TPM4P67936 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TPM4P67936 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TPM4P67936 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
TPM4P67936 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPM4P67936 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TPM4P67936 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPM4P67936 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPM4P67936 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TPM4P67936 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.05■□□□□ 0.96
TPM4P67936 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.05■□□□□ 0.96
TPM4P67936 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.05■□□□□ 0.96
TPM4P67936 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.05■□□□□ 0.96
TPM4P67936 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPM4P67936 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPM4P67936 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
TPM4P67936 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPM4P67936 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPM4P67936 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC21.05■□□□□ 0.96
TPM4P67936 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TPM4P67936 FZD10-202ENST00000539839 3282 ntBASIC21.05■□□□□ 0.96
TPM4P67936 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TPM4P67936 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.04■□□□□ 0.96
TPM4P67936 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TPM4P67936 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TPM4P67936 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TPM4P67936 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC21.04■□□□□ 0.96
TPM4P67936 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
TPM4P67936 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TPM4P67936 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC21.04■□□□□ 0.96
TPM4P67936 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TPM4P67936 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TPM4P67936 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.04■□□□□ 0.96
TPM4P67936 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TPM4P67936 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
TPM4P67936 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.04■□□□□ 0.96
TPM4P67936 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.04■□□□□ 0.96
TPM4P67936 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.04■□□□□ 0.96
TPM4P67936 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TPM4P67936 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TPM4P67936 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TPM4P67936 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
TPM4P67936 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TPM4P67936 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
TPM4P67936 AC126763.1-201ENST00000552015 2118 ntBASIC21.04■□□□□ 0.96
TPM4P67936 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
TPM4P67936 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TPM4P67936 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TPM4P67936 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TPM4P67936 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TPM4P67936 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TPM4P67936 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
TPM4P67936 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TPM4P67936 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TPM4P67936 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.03■□□□□ 0.96
TPM4P67936 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.03■□□□□ 0.96
TPM4P67936 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.03■□□□□ 0.96
TPM4P67936 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
TPM4P67936 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TPM4P67936 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TPM4P67936 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TPM4P67936 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
TPM4P67936 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.03■□□□□ 0.96
TPM4P67936 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC21.03■□□□□ 0.96
TPM4P67936 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TPM4P67936 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TPM4P67936 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TPM4P67936 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.02■□□□□ 0.96
TPM4P67936 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TPM4P67936 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TPM4P67936 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.02■□□□□ 0.96
TPM4P67936 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TPM4P67936 AC092368.3-202ENST00000574180 1591 ntBASIC21.02■□□□□ 0.96
TPM4P67936 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TPM4P67936 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.02■□□□□ 0.96
TPM4P67936 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
TPM4P67936 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TPM4P67936 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.02■□□□□ 0.96
TPM4P67936 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
TPM4P67936 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TPM4P67936 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TPM4P67936 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms