Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
VSX2P58304 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.97■□□□□ 0.47
VSX2P58304 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VSX2P58304 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
VSX2P58304 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
VSX2P58304 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VSX2P58304 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VSX2P58304 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VSX2P58304 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VSX2P58304 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
VSX2P58304 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VSX2P58304 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
VSX2P58304 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.96■□□□□ 0.47
VSX2P58304 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
VSX2P58304 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VSX2P58304 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VSX2P58304 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VSX2P58304 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
VSX2P58304 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VSX2P58304 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
VSX2P58304 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VSX2P58304 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.96■□□□□ 0.47
VSX2P58304 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.96■□□□□ 0.47
VSX2P58304 BX664615.1-201ENST00000443558 458 ntBASIC17.96■□□□□ 0.47
VSX2P58304 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
VSX2P58304 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.96■□□□□ 0.47
VSX2P58304 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VSX2P58304 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.96■□□□□ 0.47
VSX2P58304 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VSX2P58304 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.96■□□□□ 0.47
VSX2P58304 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
VSX2P58304 RCC2P3-201ENST00000418112 1537 ntBASIC17.96■□□□□ 0.47
VSX2P58304 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
VSX2P58304 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.96■□□□□ 0.47
VSX2P58304 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
VSX2P58304 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VSX2P58304 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
VSX2P58304 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
VSX2P58304 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
VSX2P58304 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VSX2P58304 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VSX2P58304 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.95■□□□□ 0.46
VSX2P58304 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
VSX2P58304 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VSX2P58304 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VSX2P58304 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.95■□□□□ 0.46
VSX2P58304 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
VSX2P58304 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VSX2P58304 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
VSX2P58304 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
VSX2P58304 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
VSX2P58304 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VSX2P58304 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
VSX2P58304 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.95■□□□□ 0.46
VSX2P58304 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
VSX2P58304 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VSX2P58304 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.95■□□□□ 0.46
VSX2P58304 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.95■□□□□ 0.46
VSX2P58304 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VSX2P58304 CR769767.2-201ENST00000622735 460 ntBASIC17.95■□□□□ 0.46
VSX2P58304 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VSX2P58304 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
VSX2P58304 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VSX2P58304 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.95■□□□□ 0.46
VSX2P58304 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VSX2P58304 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
VSX2P58304 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
VSX2P58304 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VSX2P58304 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VSX2P58304 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VSX2P58304 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
VSX2P58304 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
VSX2P58304 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
VSX2P58304 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VSX2P58304 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.95■□□□□ 0.46
VSX2P58304 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.95■□□□□ 0.46
VSX2P58304 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VSX2P58304 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.95■□□□□ 0.46
VSX2P58304 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.95■□□□□ 0.46
VSX2P58304 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VSX2P58304 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
VSX2P58304 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VSX2P58304 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VSX2P58304 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VSX2P58304 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VSX2P58304 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VSX2P58304 MIR1224-201ENST00000408193 85 ntBASIC17.94■□□□□ 0.46
VSX2P58304 AC104076.2-201ENST00000448912 469 ntBASIC17.94■□□□□ 0.46
VSX2P58304 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.94■□□□□ 0.46
VSX2P58304 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
VSX2P58304 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.94■□□□□ 0.46
VSX2P58304 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.94■□□□□ 0.46
VSX2P58304 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VSX2P58304 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.94■□□□□ 0.46
VSX2P58304 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.94■□□□□ 0.46
VSX2P58304 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.94■□□□□ 0.46
VSX2P58304 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.94■□□□□ 0.46
VSX2P58304 AC139887.4-201ENST00000607877 719 ntBASIC17.94■□□□□ 0.46
VSX2P58304 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VSX2P58304 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms