Protein–RNA interactions for Protein: P56817

BACE1, Beta-secretase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BACE1P56817 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.67■■□□□ 1.06
BACE1P56817 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.67■■□□□ 1.06
BACE1P56817 AL390719.2-201ENST00000606993 987 ntBASIC21.67■■□□□ 1.06
BACE1P56817 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.67■■□□□ 1.06
BACE1P56817 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BACE1P56817 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BACE1P56817 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BACE1P56817 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.67■■□□□ 1.06
BACE1P56817 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
BACE1P56817 PCDHAC2-203ENST00000615316 3011 ntBASIC21.66■■□□□ 1.06
BACE1P56817 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
BACE1P56817 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BACE1P56817 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.66■■□□□ 1.06
BACE1P56817 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.66■■□□□ 1.06
BACE1P56817 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
BACE1P56817 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
BACE1P56817 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BACE1P56817 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
BACE1P56817 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.66■■□□□ 1.06
BACE1P56817 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BACE1P56817 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.66■■□□□ 1.06
BACE1P56817 AC012615.1-201ENST00000565797 1299 ntBASIC21.66■■□□□ 1.06
BACE1P56817 AC090616.6-201ENST00000582640 721 ntBASIC21.66■■□□□ 1.06
BACE1P56817 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.66■■□□□ 1.06
BACE1P56817 AL732292.2-201ENST00000609649 430 ntBASIC21.66■■□□□ 1.06
BACE1P56817 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
BACE1P56817 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
BACE1P56817 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.66■■□□□ 1.06
BACE1P56817 FP475955.4-201ENST00000623131 1990 ntBASIC21.66■■□□□ 1.06
BACE1P56817 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
BACE1P56817 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
BACE1P56817 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
BACE1P56817 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
BACE1P56817 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.66■■□□□ 1.06
BACE1P56817 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
BACE1P56817 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BACE1P56817 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
BACE1P56817 KRT8P10-201ENST00000450021 1447 ntBASIC21.65■■□□□ 1.06
BACE1P56817 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
BACE1P56817 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BACE1P56817 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BACE1P56817 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.65■■□□□ 1.06
BACE1P56817 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BACE1P56817 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
BACE1P56817 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.65■■□□□ 1.06
BACE1P56817 AC141586.3-201ENST00000562166 1838 ntBASIC21.65■■□□□ 1.06
BACE1P56817 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
BACE1P56817 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.65■■□□□ 1.06
BACE1P56817 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BACE1P56817 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
BACE1P56817 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.65■■□□□ 1.06
BACE1P56817 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.65■■□□□ 1.06
BACE1P56817 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.65■■□□□ 1.06
BACE1P56817 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.65■■□□□ 1.06
BACE1P56817 AL121772.3-201ENST00000610840 674 ntBASIC21.65■■□□□ 1.06
BACE1P56817 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC21.65■■□□□ 1.06
BACE1P56817 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BACE1P56817 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BACE1P56817 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.65■■□□□ 1.06
BACE1P56817 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BACE1P56817 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
BACE1P56817 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.65■■□□□ 1.06
BACE1P56817 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.65■■□□□ 1.06
BACE1P56817 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.65■■□□□ 1.06
BACE1P56817 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
BACE1P56817 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
BACE1P56817 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
BACE1P56817 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
BACE1P56817 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
BACE1P56817 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
BACE1P56817 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
BACE1P56817 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.64■■□□□ 1.05
BACE1P56817 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BACE1P56817 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BACE1P56817 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.64■■□□□ 1.05
BACE1P56817 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.64■■□□□ 1.05
BACE1P56817 EMBP1-201ENST00000458200 901 ntBASIC21.64■■□□□ 1.05
BACE1P56817 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.64■■□□□ 1.05
BACE1P56817 AC091304.2-201ENST00000564639 760 ntBASIC21.64■■□□□ 1.05
BACE1P56817 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.64■■□□□ 1.05
BACE1P56817 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.64■■□□□ 1.05
BACE1P56817 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
BACE1P56817 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
BACE1P56817 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.64■■□□□ 1.05
BACE1P56817 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BACE1P56817 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BACE1P56817 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
BACE1P56817 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
BACE1P56817 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
BACE1P56817 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BACE1P56817 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
BACE1P56817 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.64■■□□□ 1.05
BACE1P56817 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.64■■□□□ 1.05
BACE1P56817 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.64■■□□□ 1.05
BACE1P56817 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BACE1P56817 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.63■■□□□ 1.05
BACE1P56817 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
BACE1P56817 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.63■■□□□ 1.05
BACE1P56817 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BACE1P56817 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms