Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMSP52788 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.6■□□□□ 0.41
SMSP52788 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.6■□□□□ 0.41
SMSP52788 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.6■□□□□ 0.41
SMSP52788 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMSP52788 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
SMSP52788 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMSP52788 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.6■□□□□ 0.41
SMSP52788 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.6■□□□□ 0.41
SMSP52788 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMSP52788 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMSP52788 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMSP52788 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMSP52788 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMSP52788 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
SMSP52788 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.6■□□□□ 0.41
SMSP52788 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMSP52788 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.6■□□□□ 0.41
SMSP52788 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMSP52788 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMSP52788 LETM1P2-201ENST00000597330 2178 ntBASIC17.59■□□□□ 0.41
SMSP52788 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SMSP52788 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.59■□□□□ 0.41
SMSP52788 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMSP52788 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMSP52788 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMSP52788 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMSP52788 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.59■□□□□ 0.41
SMSP52788 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMSP52788 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.59■□□□□ 0.41
SMSP52788 ZNF815P-204ENST00000434898 1737 ntBASIC17.59■□□□□ 0.41
SMSP52788 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.59■□□□□ 0.41
SMSP52788 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SMSP52788 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMSP52788 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SMSP52788 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMSP52788 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMSP52788 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.59■□□□□ 0.41
SMSP52788 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMSP52788 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMSP52788 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMSP52788 C2orf69P3-201ENST00000565542 1120 ntBASIC17.59■□□□□ 0.41
SMSP52788 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.59■□□□□ 0.41
SMSP52788 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMSP52788 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.59■□□□□ 0.41
SMSP52788 AC010947.1-201ENST00000623454 693 ntBASIC17.59■□□□□ 0.41
SMSP52788 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMSP52788 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMSP52788 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMSP52788 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SMSP52788 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SMSP52788 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.59■□□□□ 0.41
SMSP52788 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMSP52788 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMSP52788 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMSP52788 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMSP52788 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.58■□□□□ 0.41
SMSP52788 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.58■□□□□ 0.41
SMSP52788 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMSP52788 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.41
SMSP52788 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SMSP52788 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SMSP52788 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMSP52788 CYP2D8P-201ENST00000433633 1490 ntBASIC17.58■□□□□ 0.41
SMSP52788 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
SMSP52788 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMSP52788 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
SMSP52788 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.58■□□□□ 0.41
SMSP52788 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMSP52788 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
SMSP52788 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMSP52788 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMSP52788 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SMSP52788 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMSP52788 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMSP52788 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMSP52788 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
SMSP52788 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SMSP52788 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SMSP52788 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.58■□□□□ 0.4
SMSP52788 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SMSP52788 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMSP52788 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.58■□□□□ 0.4
SMSP52788 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMSP52788 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMSP52788 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMSP52788 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMSP52788 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMSP52788 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMSP52788 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.58■□□□□ 0.4
SMSP52788 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMSP52788 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
SMSP52788 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SMSP52788 TFP1-202ENST00000475455 1573 ntBASIC17.57■□□□□ 0.4
SMSP52788 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.57■□□□□ 0.4
SMSP52788 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMSP52788 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.57■□□□□ 0.4
SMSP52788 FSCN1P1-201ENST00000568912 1481 ntBASIC17.57■□□□□ 0.4
SMSP52788 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.57■□□□□ 0.4
SMSP52788 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms