Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TUBP50607 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TUBP50607 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.77■□□□□ 0.76
TUBP50607 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.77■□□□□ 0.76
TUBP50607 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.77■□□□□ 0.76
TUBP50607 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TUBP50607 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TUBP50607 AP000523.1-201ENST00000398242 1049 ntBASIC19.77■□□□□ 0.76
TUBP50607 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TUBP50607 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.77■□□□□ 0.76
TUBP50607 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TUBP50607 AC063952.2-201ENST00000498792 1227 ntBASIC19.77■□□□□ 0.76
TUBP50607 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
TUBP50607 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.77■□□□□ 0.76
TUBP50607 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.77■□□□□ 0.76
TUBP50607 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TUBP50607 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TUBP50607 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.77■□□□□ 0.75
TUBP50607 KRT8P45-201ENST00000414328 1447 ntBASIC19.76■□□□□ 0.75
TUBP50607 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.76■□□□□ 0.75
TUBP50607 KRT8P3-201ENST00000519669 1449 ntBASIC19.76■□□□□ 0.75
TUBP50607 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
TUBP50607 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBP50607 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBP50607 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBP50607 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBP50607 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBP50607 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TUBP50607 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBP50607 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBP50607 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TUBP50607 TEX21P-204ENST00000641479 1693 ntBASIC19.76■□□□□ 0.75
TUBP50607 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.76■□□□□ 0.75
TUBP50607 RNF152P1-201ENST00000397754 604 ntBASIC19.76■□□□□ 0.75
TUBP50607 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TUBP50607 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.76■□□□□ 0.75
TUBP50607 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TUBP50607 YBX1P2-201ENST00000489612 999 ntBASIC19.76■□□□□ 0.75
TUBP50607 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.76■□□□□ 0.75
TUBP50607 LINC01238-205ENST00000567549 1107 ntBASIC19.76■□□□□ 0.75
TUBP50607 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.76■□□□□ 0.75
TUBP50607 NEK4P2-201ENST00000580004 1012 ntBASIC19.76■□□□□ 0.75
TUBP50607 AC139887.4-201ENST00000607877 719 ntBASIC19.76■□□□□ 0.75
TUBP50607 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TUBP50607 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TUBP50607 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.76■□□□□ 0.75
TUBP50607 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TUBP50607 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.76■□□□□ 0.75
TUBP50607 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBP50607 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TUBP50607 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBP50607 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TUBP50607 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBP50607 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.75■□□□□ 0.75
TUBP50607 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TUBP50607 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TUBP50607 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TUBP50607 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
TUBP50607 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TUBP50607 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.75■□□□□ 0.75
TUBP50607 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.75■□□□□ 0.75
TUBP50607 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TUBP50607 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TUBP50607 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TUBP50607 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.75■□□□□ 0.75
TUBP50607 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.75■□□□□ 0.75
TUBP50607 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.75■□□□□ 0.75
TUBP50607 AC022616.7-201ENST00000525383 220 ntBASIC19.75■□□□□ 0.75
TUBP50607 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.75■□□□□ 0.75
TUBP50607 MIR4674-201ENST00000582457 87 ntBASIC19.75■□□□□ 0.75
TUBP50607 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.75■□□□□ 0.75
TUBP50607 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.75■□□□□ 0.75
TUBP50607 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TUBP50607 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TUBP50607 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.75■□□□□ 0.75
TUBP50607 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TUBP50607 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.75■□□□□ 0.75
TUBP50607 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
TUBP50607 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TUBP50607 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.75■□□□□ 0.75
TUBP50607 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
TUBP50607 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.75■□□□□ 0.75
TUBP50607 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TUBP50607 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TUBP50607 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TUBP50607 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TUBP50607 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TUBP50607 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.74■□□□□ 0.75
TUBP50607 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
TUBP50607 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.74■□□□□ 0.75
TUBP50607 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TUBP50607 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TUBP50607 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TUBP50607 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TUBP50607 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.74■□□□□ 0.75
TUBP50607 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TUBP50607 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.74■□□□□ 0.75
TUBP50607 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TUBP50607 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TUBP50607 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms