Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CENPAP49450 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CENPAP49450 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CENPAP49450 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CENPAP49450 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
CENPAP49450 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
CENPAP49450 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CENPAP49450 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CENPAP49450 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CENPAP49450 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.03■□□□□ 0.32
CENPAP49450 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CENPAP49450 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CENPAP49450 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.03■□□□□ 0.32
CENPAP49450 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.03■□□□□ 0.32
CENPAP49450 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.03■□□□□ 0.32
CENPAP49450 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.03■□□□□ 0.32
CENPAP49450 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.03■□□□□ 0.32
CENPAP49450 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CENPAP49450 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CENPAP49450 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.03■□□□□ 0.32
CENPAP49450 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CENPAP49450 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.03■□□□□ 0.32
CENPAP49450 AC008403.3-201ENST00000598924 454 ntBASIC17.03■□□□□ 0.32
CENPAP49450 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CENPAP49450 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CENPAP49450 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
CENPAP49450 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CENPAP49450 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CENPAP49450 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.03■□□□□ 0.32
CENPAP49450 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CENPAP49450 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CENPAP49450 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.03■□□□□ 0.32
CENPAP49450 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CENPAP49450 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CENPAP49450 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CENPAP49450 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
CENPAP49450 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CENPAP49450 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CENPAP49450 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CENPAP49450 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.02■□□□□ 0.32
CENPAP49450 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CENPAP49450 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CENPAP49450 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.02■□□□□ 0.32
CENPAP49450 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.02■□□□□ 0.32
CENPAP49450 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CENPAP49450 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CENPAP49450 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CENPAP49450 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CENPAP49450 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CENPAP49450 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CENPAP49450 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CENPAP49450 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CENPAP49450 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CENPAP49450 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.02■□□□□ 0.32
CENPAP49450 AC079598.2-202ENST00000546624 1451 ntBASIC17.02■□□□□ 0.32
CENPAP49450 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CENPAP49450 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.02■□□□□ 0.32
CENPAP49450 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CENPAP49450 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.02■□□□□ 0.32
CENPAP49450 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CENPAP49450 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CENPAP49450 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CENPAP49450 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CENPAP49450 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CENPAP49450 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CENPAP49450 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CENPAP49450 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CENPAP49450 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.02■□□□□ 0.31
CENPAP49450 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CENPAP49450 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CENPAP49450 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.02■□□□□ 0.31
CENPAP49450 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CENPAP49450 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CENPAP49450 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CENPAP49450 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.01■□□□□ 0.31
CENPAP49450 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CENPAP49450 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CENPAP49450 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CENPAP49450 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CENPAP49450 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CENPAP49450 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
CENPAP49450 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CENPAP49450 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CENPAP49450 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CENPAP49450 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CENPAP49450 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
CENPAP49450 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CENPAP49450 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CENPAP49450 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CENPAP49450 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.01■□□□□ 0.31
CENPAP49450 AC026366.1-201ENST00000488803 879 ntBASIC17.01■□□□□ 0.31
CENPAP49450 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CENPAP49450 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.01■□□□□ 0.31
CENPAP49450 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.01■□□□□ 0.31
CENPAP49450 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CENPAP49450 AC069544.1-201ENST00000609399 999 ntBASIC17.01■□□□□ 0.31
CENPAP49450 AL023875.1-201ENST00000640777 796 ntBASIC17.01■□□□□ 0.31
CENPAP49450 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CENPAP49450 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CENPAP49450 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms