Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDC34P49427 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC34P49427 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CDC34P49427 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC34P49427 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDC34P49427 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC34P49427 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CDC34P49427 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CDC34P49427 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC34P49427 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC34P49427 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC34P49427 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.85□□□□□ -0.03
CDC34P49427 AL355472.2-201ENST00000422958 438 ntBASIC14.85□□□□□ -0.03
CDC34P49427 NME1-207ENST00000480143 964 ntTSL 2 BASIC14.85□□□□□ -0.03
CDC34P49427 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDC34P49427 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.85□□□□□ -0.03
CDC34P49427 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC34P49427 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC14.85□□□□□ -0.03
CDC34P49427 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC34P49427 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC34P49427 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CDC34P49427 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDC34P49427 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC34P49427 MOK-233ENST00000524214 1539 ntTSL 2 BASIC14.85□□□□□ -0.03
CDC34P49427 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC34P49427 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC34P49427 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC34P49427 OR6D1P-203ENST00000641209 4860 ntBASIC14.85□□□□□ -0.03
CDC34P49427 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.85□□□□□ -0.03
CDC34P49427 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CDC34P49427 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC34P49427 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC14.85□□□□□ -0.03
CDC34P49427 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CDC34P49427 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CDC34P49427 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.84□□□□□ -0.03
CDC34P49427 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.84□□□□□ -0.03
CDC34P49427 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC14.84□□□□□ -0.03
CDC34P49427 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
CDC34P49427 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC34P49427 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC34P49427 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC34P49427 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC34P49427 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDC34P49427 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC14.84□□□□□ -0.03
CDC34P49427 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC34P49427 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC34P49427 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.84□□□□□ -0.03
CDC34P49427 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDC34P49427 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
CDC34P49427 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC34P49427 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CDC34P49427 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC14.84□□□□□ -0.03
CDC34P49427 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDC34P49427 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC14.84□□□□□ -0.03
CDC34P49427 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDC34P49427 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.84□□□□□ -0.03
CDC34P49427 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.84□□□□□ -0.03
CDC34P49427 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC34P49427 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDC34P49427 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.84□□□□□ -0.03
CDC34P49427 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CDC34P49427 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.84□□□□□ -0.03
CDC34P49427 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.84□□□□□ -0.03
CDC34P49427 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC34P49427 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CDC34P49427 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
CDC34P49427 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDC34P49427 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC34P49427 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDC34P49427 KRT8P8-201ENST00000434750 1448 ntBASIC14.83□□□□□ -0.03
CDC34P49427 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.83□□□□□ -0.03
CDC34P49427 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDC34P49427 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
CDC34P49427 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDC34P49427 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDC34P49427 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDC34P49427 LINC00896-202ENST00000609602 2128 ntBASIC14.83□□□□□ -0.04
CDC34P49427 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC34P49427 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC34P49427 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.83□□□□□ -0.04
CDC34P49427 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC34P49427 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
CDC34P49427 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.83□□□□□ -0.04
CDC34P49427 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC34P49427 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC34P49427 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CDC34P49427 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC34P49427 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC34P49427 JTB-203ENST00000368589 1216 ntTSL 2 BASIC14.83□□□□□ -0.04
CDC34P49427 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDC34P49427 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDC34P49427 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDC34P49427 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC14.83□□□□□ -0.04
CDC34P49427 SP2-202ENST00000613139 908 ntTSL 5 BASIC14.83□□□□□ -0.04
CDC34P49427 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC34P49427 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDC34P49427 NXN-202ENST00000537628 1340 ntTSL 3 BASIC14.83□□□□□ -0.04
CDC34P49427 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC34P49427 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CDC34P49427 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms