Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC9A3P48764 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.23■□□□□ 0.35
SLC9A3P48764 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.23■□□□□ 0.35
SLC9A3P48764 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC9A3P48764 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC9A3P48764 AC069544.1-201ENST00000609399 999 ntBASIC17.23■□□□□ 0.35
SLC9A3P48764 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
SLC9A3P48764 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC9A3P48764 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC9A3P48764 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC9A3P48764 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SLC9A3P48764 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SLC9A3P48764 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC9A3P48764 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC9A3P48764 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC9A3P48764 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC9A3P48764 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC9A3P48764 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC9A3P48764 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC9A3P48764 AL512353.2-201ENST00000448759 1962 ntBASIC17.22■□□□□ 0.35
SLC9A3P48764 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SLC9A3P48764 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC9A3P48764 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SLC9A3P48764 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
SLC9A3P48764 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SLC9A3P48764 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC9A3P48764 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.22■□□□□ 0.35
SLC9A3P48764 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC9A3P48764 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC9A3P48764 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC9A3P48764 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC9A3P48764 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.22■□□□□ 0.35
SLC9A3P48764 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC9A3P48764 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.22■□□□□ 0.35
SLC9A3P48764 AC026366.1-201ENST00000488803 879 ntBASIC17.22■□□□□ 0.35
SLC9A3P48764 RNA5SP413-201ENST00000516373 109 ntBASIC17.22■□□□□ 0.35
SLC9A3P48764 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.22■□□□□ 0.35
SLC9A3P48764 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.22■□□□□ 0.35
SLC9A3P48764 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.22■□□□□ 0.35
SLC9A3P48764 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.22■□□□□ 0.35
SLC9A3P48764 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC9A3P48764 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC9A3P48764 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC9A3P48764 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.22■□□□□ 0.35
SLC9A3P48764 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC9A3P48764 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC9A3P48764 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC9A3P48764 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
SLC9A3P48764 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC9A3P48764 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC9A3P48764 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC9A3P48764 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC9A3P48764 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC9A3P48764 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC9A3P48764 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC9A3P48764 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SLC9A3P48764 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC9A3P48764 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC9A3P48764 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC9A3P48764 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC9A3P48764 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
SLC9A3P48764 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC9A3P48764 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SLC9A3P48764 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SLC9A3P48764 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC9A3P48764 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SLC9A3P48764 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC9A3P48764 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC9A3P48764 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC9A3P48764 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.21■□□□□ 0.35
SLC9A3P48764 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC9A3P48764 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC9A3P48764 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC9A3P48764 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC9A3P48764 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC9A3P48764 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC9A3P48764 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC9A3P48764 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
SLC9A3P48764 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SLC9A3P48764 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SLC9A3P48764 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
SLC9A3P48764 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SLC9A3P48764 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.21■□□□□ 0.34
SLC9A3P48764 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.21■□□□□ 0.34
SLC9A3P48764 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC9A3P48764 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC9A3P48764 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC9A3P48764 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.2■□□□□ 0.34
SLC9A3P48764 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.2■□□□□ 0.34
SLC9A3P48764 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC9A3P48764 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC9A3P48764 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC9A3P48764 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC9A3P48764 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.2■□□□□ 0.34
SLC9A3P48764 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC9A3P48764 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC9A3P48764 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.2■□□□□ 0.34
SLC9A3P48764 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC9A3P48764 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.2■□□□□ 0.34
SLC9A3P48764 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms