Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.74■□□□□ 0.27
CSNK1A1P48729 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1A1P48729 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
CSNK1A1P48729 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CSNK1A1P48729 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CSNK1A1P48729 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1A1P48729 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.74■□□□□ 0.27
CSNK1A1P48729 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1A1P48729 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.74■□□□□ 0.27
CSNK1A1P48729 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.74■□□□□ 0.27
CSNK1A1P48729 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.74■□□□□ 0.27
CSNK1A1P48729 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.74■□□□□ 0.27
CSNK1A1P48729 AC093503.3-201ENST00000624917 2352 ntBASIC16.74■□□□□ 0.27
CSNK1A1P48729 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1A1P48729 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1A1P48729 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1A1P48729 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1A1P48729 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1A1P48729 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.74■□□□□ 0.27
CSNK1A1P48729 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.74■□□□□ 0.27
CSNK1A1P48729 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1A1P48729 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.74■□□□□ 0.27
CSNK1A1P48729 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
CSNK1A1P48729 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CSNK1A1P48729 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSNK1A1P48729 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSNK1A1P48729 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSNK1A1P48729 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CSNK1A1P48729 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSNK1A1P48729 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CSNK1A1P48729 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSNK1A1P48729 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CSNK1A1P48729 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSNK1A1P48729 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.73■□□□□ 0.27
CSNK1A1P48729 RBM17P1-201ENST00000453646 1190 ntBASIC16.73■□□□□ 0.27
CSNK1A1P48729 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.73■□□□□ 0.27
CSNK1A1P48729 AC093827.2-201ENST00000512654 315 ntBASIC16.73■□□□□ 0.27
CSNK1A1P48729 MIR4497-201ENST00000583208 89 ntBASIC16.73■□□□□ 0.27
CSNK1A1P48729 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CSNK1A1P48729 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.73■□□□□ 0.27
CSNK1A1P48729 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CSNK1A1P48729 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CSNK1A1P48729 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSNK1A1P48729 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.73■□□□□ 0.27
CSNK1A1P48729 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CSNK1A1P48729 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CSNK1A1P48729 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CSNK1A1P48729 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSNK1A1P48729 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSNK1A1P48729 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSNK1A1P48729 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CSNK1A1P48729 CROCCP3-202ENST00000420820 1947 ntBASIC16.72■□□□□ 0.27
CSNK1A1P48729 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
CSNK1A1P48729 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSNK1A1P48729 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSNK1A1P48729 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSNK1A1P48729 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CSNK1A1P48729 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSNK1A1P48729 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSNK1A1P48729 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CSNK1A1P48729 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.72■□□□□ 0.27
CSNK1A1P48729 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CSNK1A1P48729 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CSNK1A1P48729 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.72■□□□□ 0.27
CSNK1A1P48729 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CSNK1A1P48729 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.72■□□□□ 0.27
CSNK1A1P48729 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSNK1A1P48729 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.72■□□□□ 0.27
CSNK1A1P48729 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.72■□□□□ 0.27
CSNK1A1P48729 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CSNK1A1P48729 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
CSNK1A1P48729 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSNK1A1P48729 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSNK1A1P48729 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSNK1A1P48729 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSNK1A1P48729 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSNK1A1P48729 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSNK1A1P48729 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CSNK1A1P48729 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CSNK1A1P48729 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CSNK1A1P48729 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CSNK1A1P48729 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSNK1A1P48729 HTR7P1-202ENST00000624664 4411 ntBASIC16.71■□□□□ 0.27
CSNK1A1P48729 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSNK1A1P48729 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CSNK1A1P48729 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.71■□□□□ 0.27
CSNK1A1P48729 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.71■□□□□ 0.27
CSNK1A1P48729 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSNK1A1P48729 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSNK1A1P48729 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.71■□□□□ 0.27
CSNK1A1P48729 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.71■□□□□ 0.27
CSNK1A1P48729 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.71■□□□□ 0.27
CSNK1A1P48729 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
CSNK1A1P48729 AP005242.2-201ENST00000580065 1175 ntBASIC16.71■□□□□ 0.27
CSNK1A1P48729 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.71■□□□□ 0.27
CSNK1A1P48729 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
CSNK1A1P48729 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CSNK1A1P48729 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.71■□□□□ 0.27
CSNK1A1P48729 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.71■□□□□ 0.27
CSNK1A1P48729 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms