Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
PCP4P48539 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PCP4P48539 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PCP4P48539 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.99□□□□□ -0.33
PCP4P48539 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC12.99□□□□□ -0.33
PCP4P48539 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PCP4P48539 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
PCP4P48539 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.99□□□□□ -0.33
PCP4P48539 AC105020.1-201ENST00000435356 2205 ntBASIC12.98□□□□□ -0.33
PCP4P48539 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCP4P48539 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC12.98□□□□□ -0.33
PCP4P48539 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCP4P48539 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCP4P48539 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PCP4P48539 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
PCP4P48539 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
PCP4P48539 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PCP4P48539 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCP4P48539 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCP4P48539 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCP4P48539 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCP4P48539 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCP4P48539 PXK-206ENST00000463280 2825 ntTSL 2 BASIC12.98□□□□□ -0.33
PCP4P48539 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCP4P48539 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC12.98□□□□□ -0.33
PCP4P48539 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCP4P48539 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
PCP4P48539 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PCP4P48539 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCP4P48539 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.98□□□□□ -0.33
PCP4P48539 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
PCP4P48539 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCP4P48539 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCP4P48539 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCP4P48539 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCP4P48539 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC12.98□□□□□ -0.33
PCP4P48539 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC12.98□□□□□ -0.33
PCP4P48539 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PCP4P48539 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC12.98□□□□□ -0.33
PCP4P48539 STK25-205ENST00000405883 1904 ntTSL 2 BASIC12.98□□□□□ -0.33
PCP4P48539 ABALON-201ENST00000629058 1903 ntBASIC12.98□□□□□ -0.33
PCP4P48539 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.98□□□□□ -0.33
PCP4P48539 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCP4P48539 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCP4P48539 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCP4P48539 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC12.97□□□□□ -0.33
PCP4P48539 POM121L4P-202ENST00000427789 1891 ntBASIC12.97□□□□□ -0.33
PCP4P48539 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC12.97□□□□□ -0.33
PCP4P48539 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC12.97□□□□□ -0.33
PCP4P48539 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
PCP4P48539 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC12.97□□□□□ -0.33
PCP4P48539 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
PCP4P48539 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCP4P48539 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PCP4P48539 AC145098.2-201ENST00000623593 3026 ntBASIC12.97□□□□□ -0.33
PCP4P48539 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCP4P48539 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PCP4P48539 AL049796.1-201ENST00000565336 1766 ntBASIC12.97□□□□□ -0.33
PCP4P48539 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCP4P48539 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCP4P48539 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
PCP4P48539 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCP4P48539 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCP4P48539 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC12.97□□□□□ -0.33
PCP4P48539 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCP4P48539 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCP4P48539 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCP4P48539 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCP4P48539 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCP4P48539 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC12.97□□□□□ -0.33
PCP4P48539 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCP4P48539 OVCH1-AS1-204ENST00000641955 5529 ntBASIC12.97□□□□□ -0.33
PCP4P48539 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC12.97□□□□□ -0.33
PCP4P48539 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PCP4P48539 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCP4P48539 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
PCP4P48539 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
PCP4P48539 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.97□□□□□ -0.33
PCP4P48539 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PCP4P48539 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PCP4P48539 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
PCP4P48539 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PCP4P48539 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PCP4P48539 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PCP4P48539 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC12.96□□□□□ -0.33
PCP4P48539 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.96□□□□□ -0.33
PCP4P48539 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
PCP4P48539 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
PCP4P48539 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
PCP4P48539 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PCP4P48539 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PCP4P48539 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PCP4P48539 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
PCP4P48539 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.96□□□□□ -0.34
PCP4P48539 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.96□□□□□ -0.34
PCP4P48539 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
PCP4P48539 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
PCP4P48539 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
PCP4P48539 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
PCP4P48539 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms