Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHKAP35790 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CHKAP35790 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.83■□□□□ 0.77
CHKAP35790 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHKAP35790 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHKAP35790 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHKAP35790 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
CHKAP35790 AC005521.1-201ENST00000393351 872 ntBASIC19.83■□□□□ 0.77
CHKAP35790 MIR1224-201ENST00000408193 85 ntBASIC19.83■□□□□ 0.77
CHKAP35790 TMPOP1-202ENST00000424642 1267 ntBASIC19.83■□□□□ 0.77
CHKAP35790 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.83■□□□□ 0.77
CHKAP35790 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
CHKAP35790 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CHKAP35790 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.83■□□□□ 0.77
CHKAP35790 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHKAP35790 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.83■□□□□ 0.76
CHKAP35790 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CHKAP35790 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
CHKAP35790 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHKAP35790 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHKAP35790 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.83■□□□□ 0.76
CHKAP35790 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHKAP35790 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CHKAP35790 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHKAP35790 FP475955.4-201ENST00000623131 1990 ntBASIC19.83■□□□□ 0.76
CHKAP35790 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHKAP35790 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHKAP35790 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.82■□□□□ 0.76
CHKAP35790 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.82■□□□□ 0.76
CHKAP35790 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHKAP35790 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHKAP35790 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
CHKAP35790 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHKAP35790 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHKAP35790 CA15P1-201ENST00000481698 905 ntBASIC19.82■□□□□ 0.76
CHKAP35790 CKBP1-201ENST00000565489 1086 ntBASIC19.82■□□□□ 0.76
CHKAP35790 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHKAP35790 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.82■□□□□ 0.76
CHKAP35790 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.82■□□□□ 0.76
CHKAP35790 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHKAP35790 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHKAP35790 AC104417.2-201ENST00000562989 1793 ntBASIC19.82■□□□□ 0.76
CHKAP35790 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CHKAP35790 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHKAP35790 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
CHKAP35790 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHKAP35790 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHKAP35790 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHKAP35790 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHKAP35790 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHKAP35790 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHKAP35790 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHKAP35790 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHKAP35790 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.81■□□□□ 0.76
CHKAP35790 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.81■□□□□ 0.76
CHKAP35790 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHKAP35790 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHKAP35790 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.81■□□□□ 0.76
CHKAP35790 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CHKAP35790 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHKAP35790 LIN28AP1-201ENST00000429574 405 ntBASIC19.81■□□□□ 0.76
CHKAP35790 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CHKAP35790 ECEL1P2-202ENST00000465689 757 ntBASIC19.81■□□□□ 0.76
CHKAP35790 PRSS44-201ENST00000515154 1146 ntBASIC19.81■□□□□ 0.76
CHKAP35790 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.81■□□□□ 0.76
CHKAP35790 RN7SL850P-201ENST00000579959 291 ntBASIC19.81■□□□□ 0.76
CHKAP35790 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHKAP35790 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.81■□□□□ 0.76
CHKAP35790 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CHKAP35790 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHKAP35790 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHKAP35790 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHKAP35790 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.81■□□□□ 0.76
CHKAP35790 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHKAP35790 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHKAP35790 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CHKAP35790 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHKAP35790 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHKAP35790 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHKAP35790 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.8■□□□□ 0.76
CHKAP35790 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHKAP35790 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.8■□□□□ 0.76
CHKAP35790 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHKAP35790 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHKAP35790 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHKAP35790 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHKAP35790 TERF1P1-201ENST00000311003 1181 ntBASIC19.8■□□□□ 0.76
CHKAP35790 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CHKAP35790 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.8■□□□□ 0.76
CHKAP35790 TSPY17P-201ENST00000450329 467 ntBASIC19.8■□□□□ 0.76
CHKAP35790 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHKAP35790 AC010653.2-201ENST00000623505 997 ntBASIC19.8■□□□□ 0.76
CHKAP35790 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
CHKAP35790 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.8■□□□□ 0.76
CHKAP35790 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHKAP35790 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHKAP35790 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CHKAP35790 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CHKAP35790 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHKAP35790 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms