Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCN1P35523 HTR7P1-202ENST00000624664 4411 ntBASIC21.37■■□□□ 1.01
CLCN1P35523 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCN1P35523 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLCN1P35523 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLCN1P35523 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CLCN1P35523 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CLCN1P35523 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC21.36■■□□□ 1.01
CLCN1P35523 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLCN1P35523 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLCN1P35523 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLCN1P35523 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLCN1P35523 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CLCN1P35523 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CLCN1P35523 GPX1P1-201ENST00000388829 606 ntBASIC21.36■■□□□ 1.01
CLCN1P35523 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.36■■□□□ 1.01
CLCN1P35523 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
CLCN1P35523 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.36■■□□□ 1.01
CLCN1P35523 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC21.36■■□□□ 1.01
CLCN1P35523 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLCN1P35523 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CLCN1P35523 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CLCN1P35523 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CLCN1P35523 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.36■■□□□ 1.01
CLCN1P35523 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.36■■□□□ 1.01
CLCN1P35523 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
CLCN1P35523 KRT8P20-201ENST00000423953 1409 ntBASIC21.36■■□□□ 1.01
CLCN1P35523 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLCN1P35523 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.36■■□□□ 1.01
CLCN1P35523 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
CLCN1P35523 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CLCN1P35523 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC21.36■■□□□ 1.01
CLCN1P35523 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CLCN1P35523 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.36■■□□□ 1.01
CLCN1P35523 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
CLCN1P35523 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLCN1P35523 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC21.35■■□□□ 1.01
CLCN1P35523 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLCN1P35523 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CLCN1P35523 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC21.35■■□□□ 1.01
CLCN1P35523 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLCN1P35523 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC21.35■■□□□ 1.01
CLCN1P35523 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLCN1P35523 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CLCN1P35523 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.35■■□□□ 1.01
CLCN1P35523 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.35■■□□□ 1.01
CLCN1P35523 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.35■■□□□ 1.01
CLCN1P35523 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.35■■□□□ 1.01
CLCN1P35523 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.35■■□□□ 1.01
CLCN1P35523 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
CLCN1P35523 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.35■■□□□ 1.01
CLCN1P35523 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.35■■□□□ 1.01
CLCN1P35523 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLCN1P35523 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CLCN1P35523 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLCN1P35523 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC21.35■■□□□ 1.01
CLCN1P35523 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLCN1P35523 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLCN1P35523 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLCN1P35523 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLCN1P35523 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
CLCN1P35523 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CLCN1P35523 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLCN1P35523 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CLCN1P35523 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLCN1P35523 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC21.34■■□□□ 1.01
CLCN1P35523 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CLCN1P35523 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CLCN1P35523 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
CLCN1P35523 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLCN1P35523 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.34■■□□□ 1.01
CLCN1P35523 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CLCN1P35523 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CLCN1P35523 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CLCN1P35523 TSPY6P-201ENST00000448518 926 ntBASIC21.34■■□□□ 1.01
CLCN1P35523 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.34■■□□□ 1.01
CLCN1P35523 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.34■■□□□ 1.01
CLCN1P35523 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.34■■□□□ 1.01
CLCN1P35523 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CLCN1P35523 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLCN1P35523 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.34■■□□□ 1.01
CLCN1P35523 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.34■■□□□ 1.01
CLCN1P35523 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLCN1P35523 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CLCN1P35523 AL596257.1-201ENST00000641463 2694 ntBASIC21.34■■□□□ 1.01
CLCN1P35523 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLCN1P35523 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLCN1P35523 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC21.34■■□□□ 1.01
CLCN1P35523 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLCN1P35523 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC21.34■■□□□ 1.01
CLCN1P35523 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLCN1P35523 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC21.33■■□□□ 1.01
CLCN1P35523 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.33■■□□□ 1.01
CLCN1P35523 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CLCN1P35523 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLCN1P35523 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLCN1P35523 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC21.33■■□□□ 1.01
CLCN1P35523 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLCN1P35523 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLCN1P35523 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms