Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC24.59■■□□□ 1.53
RXRBP28702 AC064836.3-201ENST00000607928 673 ntBASIC24.59■■□□□ 1.53
RXRBP28702 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RXRBP28702 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
RXRBP28702 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RXRBP28702 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
RXRBP28702 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RXRBP28702 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RXRBP28702 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
RXRBP28702 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RXRBP28702 KRT89P-201ENST00000620027 1478 ntBASIC24.58■■□□□ 1.53
RXRBP28702 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
RXRBP28702 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC24.58■■□□□ 1.53
RXRBP28702 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
RXRBP28702 CD99-202ENST00000381180 530 ntTSL 2 BASIC24.58■■□□□ 1.53
RXRBP28702 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC24.58■■□□□ 1.53
RXRBP28702 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC24.58■■□□□ 1.53
RXRBP28702 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
RXRBP28702 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC24.58■■□□□ 1.53
RXRBP28702 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
RXRBP28702 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
RXRBP28702 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RXRBP28702 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
RXRBP28702 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RXRBP28702 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RXRBP28702 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RXRBP28702 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RXRBP28702 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
RXRBP28702 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC24.57■■□□□ 1.52
RXRBP28702 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RXRBP28702 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RXRBP28702 AC007274.1-201ENST00000439805 662 ntBASIC24.57■■□□□ 1.52
RXRBP28702 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC24.57■■□□□ 1.52
RXRBP28702 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RXRBP28702 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC24.57■■□□□ 1.52
RXRBP28702 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RXRBP28702 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC24.57■■□□□ 1.52
RXRBP28702 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RXRBP28702 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RXRBP28702 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RXRBP28702 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC24.57■■□□□ 1.52
RXRBP28702 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC24.57■■□□□ 1.52
RXRBP28702 AL356309.3-201ENST00000624132 1934 ntBASIC24.57■■□□□ 1.52
RXRBP28702 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RXRBP28702 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RXRBP28702 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RXRBP28702 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
RXRBP28702 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC24.56■■□□□ 1.52
RXRBP28702 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC24.56■■□□□ 1.52
RXRBP28702 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
RXRBP28702 COPE-202ENST00000349893 948 ntTSL 2 BASIC24.56■■□□□ 1.52
RXRBP28702 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
RXRBP28702 KIRREL3-AS3-201ENST00000404882 831 ntBASIC24.56■■□□□ 1.52
RXRBP28702 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC24.56■■□□□ 1.52
RXRBP28702 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC24.56■■□□□ 1.52
RXRBP28702 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
RXRBP28702 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC24.56■■□□□ 1.52
RXRBP28702 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC24.56■■□□□ 1.52
RXRBP28702 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC24.56■■□□□ 1.52
RXRBP28702 MIR4745-201ENST00000577608 62 ntBASIC24.56■■□□□ 1.52
RXRBP28702 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
RXRBP28702 MIR3180-4-201ENST00000582223 153 ntBASIC24.56■■□□□ 1.52
RXRBP28702 AC093028.1-201ENST00000622998 982 ntBASIC24.56■■□□□ 1.52
RXRBP28702 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RXRBP28702 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
RXRBP28702 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RXRBP28702 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
RXRBP28702 MOK-225ENST00000522867 1883 ntTSL 5 BASIC24.55■■□□□ 1.52
RXRBP28702 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC24.55■■□□□ 1.52
RXRBP28702 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RXRBP28702 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RXRBP28702 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC24.55■■□□□ 1.52
RXRBP28702 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC24.55■■□□□ 1.52
RXRBP28702 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RXRBP28702 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
RXRBP28702 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC24.55■■□□□ 1.52
RXRBP28702 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC24.55■■□□□ 1.52
RXRBP28702 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC24.55■■□□□ 1.52
RXRBP28702 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RXRBP28702 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC24.55■■□□□ 1.52
RXRBP28702 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RXRBP28702 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RXRBP28702 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
RXRBP28702 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RXRBP28702 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC24.55■■□□□ 1.52
RXRBP28702 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RXRBP28702 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RXRBP28702 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC24.54■■□□□ 1.52
RXRBP28702 AL162377.1-201ENST00000618844 1793 ntBASIC24.54■■□□□ 1.52
RXRBP28702 AC007225.1-201ENST00000566331 1836 ntBASIC24.54■■□□□ 1.52
RXRBP28702 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC24.54■■□□□ 1.52
RXRBP28702 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC24.54■■□□□ 1.52
RXRBP28702 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RXRBP28702 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
RXRBP28702 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC24.54■■□□□ 1.52
RXRBP28702 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC24.54■■□□□ 1.52
RXRBP28702 RBSN-204ENST00000449050 903 ntTSL 2 BASIC24.54■■□□□ 1.52
RXRBP28702 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
RXRBP28702 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC24.54■■□□□ 1.52
RXRBP28702 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC24.54■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms