Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.45■□□□□ 0.86
RFX1P22670 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.45■□□□□ 0.86
RFX1P22670 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.45■□□□□ 0.86
RFX1P22670 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.45■□□□□ 0.86
RFX1P22670 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.45■□□□□ 0.86
RFX1P22670 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RFX1P22670 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RFX1P22670 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RFX1P22670 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RFX1P22670 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RFX1P22670 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
RFX1P22670 AC073508.3-201ENST00000619697 1419 ntBASIC20.44■□□□□ 0.86
RFX1P22670 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.44■□□□□ 0.86
RFX1P22670 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFX1P22670 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFX1P22670 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
RFX1P22670 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RFX1P22670 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFX1P22670 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFX1P22670 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.44■□□□□ 0.86
RFX1P22670 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFX1P22670 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
RFX1P22670 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RFX1P22670 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
RFX1P22670 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.44■□□□□ 0.86
RFX1P22670 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
RFX1P22670 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFX1P22670 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFX1P22670 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFX1P22670 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFX1P22670 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFX1P22670 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.44■□□□□ 0.86
RFX1P22670 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
RFX1P22670 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFX1P22670 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFX1P22670 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFX1P22670 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFX1P22670 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.44■□□□□ 0.86
RFX1P22670 AC120498.9-201ENST00000339021 3867 ntBASIC20.44■□□□□ 0.86
RFX1P22670 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
RFX1P22670 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFX1P22670 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
RFX1P22670 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
RFX1P22670 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFX1P22670 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RFX1P22670 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.43■□□□□ 0.86
RFX1P22670 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.43■□□□□ 0.86
RFX1P22670 AC116562.2-201ENST00000507042 360 ntBASIC20.43■□□□□ 0.86
RFX1P22670 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFX1P22670 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.43■□□□□ 0.86
RFX1P22670 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFX1P22670 AC091076.1-201ENST00000610741 619 ntBASIC20.43■□□□□ 0.86
RFX1P22670 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
RFX1P22670 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFX1P22670 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.43■□□□□ 0.86
RFX1P22670 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFX1P22670 KRT8P11-201ENST00000409686 1436 ntBASIC20.43■□□□□ 0.86
RFX1P22670 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.43■□□□□ 0.86
RFX1P22670 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFX1P22670 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.43■□□□□ 0.86
RFX1P22670 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFX1P22670 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
RFX1P22670 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
RFX1P22670 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFX1P22670 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.42■□□□□ 0.86
RFX1P22670 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFX1P22670 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFX1P22670 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RFX1P22670 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.42■□□□□ 0.86
RFX1P22670 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFX1P22670 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
RFX1P22670 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.42■□□□□ 0.86
RFX1P22670 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.42■□□□□ 0.86
RFX1P22670 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RFX1P22670 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RFX1P22670 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.42■□□□□ 0.86
RFX1P22670 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.42■□□□□ 0.86
RFX1P22670 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFX1P22670 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RFX1P22670 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.42■□□□□ 0.86
RFX1P22670 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.42■□□□□ 0.86
RFX1P22670 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.42■□□□□ 0.86
RFX1P22670 AC010203.1-204ENST00000548782 407 ntBASIC20.42■□□□□ 0.86
RFX1P22670 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.42■□□□□ 0.86
RFX1P22670 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.42■□□□□ 0.86
RFX1P22670 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.42■□□□□ 0.86
RFX1P22670 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFX1P22670 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFX1P22670 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFX1P22670 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
RFX1P22670 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFX1P22670 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFX1P22670 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.42■□□□□ 0.86
RFX1P22670 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RFX1P22670 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RFX1P22670 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX1P22670 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
RFX1P22670 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX1P22670 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX1P22670 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms