Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CCL1P22362 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL1P22362 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.19■□□□□ 0.18
CCL1P22362 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL1P22362 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL1P22362 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL1P22362 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCL1P22362 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CCL1P22362 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CCL1P22362 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CCL1P22362 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.18■□□□□ 0.18
CCL1P22362 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCL1P22362 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCL1P22362 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCL1P22362 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.18■□□□□ 0.18
CCL1P22362 NOC2LP2-201ENST00000407594 1944 ntBASIC16.18■□□□□ 0.18
CCL1P22362 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCL1P22362 B3GAT3P1-201ENST00000471720 806 ntBASIC16.18■□□□□ 0.18
CCL1P22362 AC011506.1-201ENST00000474329 610 ntBASIC16.18■□□□□ 0.18
CCL1P22362 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCL1P22362 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCL1P22362 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.18■□□□□ 0.18
CCL1P22362 CD99P1-205ENST00000527459 561 ntBASIC16.18■□□□□ 0.18
CCL1P22362 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.18■□□□□ 0.18
CCL1P22362 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.18■□□□□ 0.18
CCL1P22362 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.18■□□□□ 0.18
CCL1P22362 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.18■□□□□ 0.18
CCL1P22362 MIR4651-201ENST00000582622 73 ntBASIC16.18■□□□□ 0.18
CCL1P22362 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CCL1P22362 MIR6786-201ENST00000616843 113 ntBASIC16.18■□□□□ 0.18
CCL1P22362 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.18■□□□□ 0.18
CCL1P22362 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.18■□□□□ 0.18
CCL1P22362 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.18■□□□□ 0.18
CCL1P22362 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.18■□□□□ 0.18
CCL1P22362 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
CCL1P22362 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCL1P22362 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.18■□□□□ 0.18
CCL1P22362 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCL1P22362 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCL1P22362 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCL1P22362 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.18■□□□□ 0.18
CCL1P22362 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CCL1P22362 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.18■□□□□ 0.18
CCL1P22362 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCL1P22362 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CCL1P22362 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CCL1P22362 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.17■□□□□ 0.18
CCL1P22362 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.17■□□□□ 0.18
CCL1P22362 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL1P22362 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CCL1P22362 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CCL1P22362 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL1P22362 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CCL1P22362 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL1P22362 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.17■□□□□ 0.18
CCL1P22362 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCL1P22362 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.17■□□□□ 0.18
CCL1P22362 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL1P22362 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CCL1P22362 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCL1P22362 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
CCL1P22362 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCL1P22362 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.17■□□□□ 0.18
CCL1P22362 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.17■□□□□ 0.18
CCL1P22362 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.17■□□□□ 0.18
CCL1P22362 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.17■□□□□ 0.18
CCL1P22362 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.17■□□□□ 0.18
CCL1P22362 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
CCL1P22362 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.17■□□□□ 0.18
CCL1P22362 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL1P22362 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL1P22362 AL109659.2-201ENST00000606809 1674 ntBASIC16.17■□□□□ 0.18
CCL1P22362 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL1P22362 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL1P22362 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
CCL1P22362 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCL1P22362 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL1P22362 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL1P22362 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CCL1P22362 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
CCL1P22362 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.16■□□□□ 0.18
CCL1P22362 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.16■□□□□ 0.18
CCL1P22362 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL1P22362 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.16■□□□□ 0.18
CCL1P22362 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.16■□□□□ 0.18
CCL1P22362 MESTP1-201ENST00000404287 994 ntBASIC16.16■□□□□ 0.18
CCL1P22362 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CCL1P22362 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.16■□□□□ 0.18
CCL1P22362 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.16■□□□□ 0.18
CCL1P22362 AP000692.2-201ENST00000608391 879 ntBASIC16.16■□□□□ 0.18
CCL1P22362 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL1P22362 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL1P22362 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL1P22362 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.16■□□□□ 0.18
CCL1P22362 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CCL1P22362 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL1P22362 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL1P22362 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.16■□□□□ 0.18
CCL1P22362 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.16■□□□□ 0.18
CCL1P22362 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms