Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DPA1P20036 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.97■□□□□ 0.63
HLA-DPA1P20036 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
HLA-DPA1P20036 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
HLA-DPA1P20036 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DPA1P20036 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.97■□□□□ 0.63
HLA-DPA1P20036 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DPA1P20036 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.97■□□□□ 0.63
HLA-DPA1P20036 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.97■□□□□ 0.63
HLA-DPA1P20036 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.97■□□□□ 0.63
HLA-DPA1P20036 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DPA1P20036 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DPA1P20036 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DPA1P20036 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DPA1P20036 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DPA1P20036 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DPA1P20036 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
HLA-DPA1P20036 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.97■□□□□ 0.63
HLA-DPA1P20036 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DPA1P20036 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DPA1P20036 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DPA1P20036 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DPA1P20036 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DPA1P20036 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DPA1P20036 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
HLA-DPA1P20036 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DPA1P20036 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DPA1P20036 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.96■□□□□ 0.63
HLA-DPA1P20036 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.96■□□□□ 0.63
HLA-DPA1P20036 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DPA1P20036 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HLA-DPA1P20036 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.96■□□□□ 0.63
HLA-DPA1P20036 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DPA1P20036 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DPA1P20036 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.96■□□□□ 0.63
HLA-DPA1P20036 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.96■□□□□ 0.63
HLA-DPA1P20036 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DPA1P20036 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.96■□□□□ 0.63
HLA-DPA1P20036 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DPA1P20036 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DPA1P20036 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.96■□□□□ 0.63
HLA-DPA1P20036 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.96■□□□□ 0.63
HLA-DPA1P20036 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.96■□□□□ 0.63
HLA-DPA1P20036 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
HLA-DPA1P20036 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DPA1P20036 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DPA1P20036 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
HLA-DPA1P20036 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
HLA-DPA1P20036 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
HLA-DPA1P20036 AL138781.2-201ENST00000617896 1843 ntBASIC18.95■□□□□ 0.62
HLA-DPA1P20036 RCC2P3-201ENST00000418112 1537 ntBASIC18.95■□□□□ 0.62
HLA-DPA1P20036 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
HLA-DPA1P20036 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DPA1P20036 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DPA1P20036 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DPA1P20036 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
HLA-DPA1P20036 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.95■□□□□ 0.62
HLA-DPA1P20036 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.95■□□□□ 0.62
HLA-DPA1P20036 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.95■□□□□ 0.62
HLA-DPA1P20036 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
HLA-DPA1P20036 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DPA1P20036 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
HLA-DPA1P20036 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DPA1P20036 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
HLA-DPA1P20036 MIR1238-201ENST00000408483 83 ntBASIC18.95■□□□□ 0.62
HLA-DPA1P20036 SLC25A1P2-201ENST00000430693 912 ntBASIC18.95■□□□□ 0.62
HLA-DPA1P20036 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DPA1P20036 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DPA1P20036 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.95■□□□□ 0.62
HLA-DPA1P20036 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
HLA-DPA1P20036 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.95■□□□□ 0.62
HLA-DPA1P20036 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DPA1P20036 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
HLA-DPA1P20036 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DPA1P20036 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.95■□□□□ 0.62
HLA-DPA1P20036 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.95■□□□□ 0.62
HLA-DPA1P20036 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DPA1P20036 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
HLA-DPA1P20036 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DPA1P20036 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DPA1P20036 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
HLA-DPA1P20036 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DPA1P20036 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.94■□□□□ 0.62
HLA-DPA1P20036 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DPA1P20036 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.94■□□□□ 0.62
HLA-DPA1P20036 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.94■□□□□ 0.62
HLA-DPA1P20036 AL390955.1-201ENST00000428694 934 ntBASIC18.94■□□□□ 0.62
HLA-DPA1P20036 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.94■□□□□ 0.62
HLA-DPA1P20036 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DPA1P20036 AC008622.2-201ENST00000617006 1229 ntBASIC18.94■□□□□ 0.62
HLA-DPA1P20036 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DPA1P20036 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DPA1P20036 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DPA1P20036 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DPA1P20036 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DPA1P20036 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DPA1P20036 MTMR9LP-203ENST00000426597 1545 ntBASIC18.94■□□□□ 0.62
HLA-DPA1P20036 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.94■□□□□ 0.62
HLA-DPA1P20036 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DPA1P20036 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms