Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CD58P19256 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD58P19256 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD58P19256 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD58P19256 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD58P19256 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CD58P19256 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CD58P19256 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.15■□□□□ 0.82
CD58P19256 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.15■□□□□ 0.82
CD58P19256 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD58P19256 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CD58P19256 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CD58P19256 TSPY14P-201ENST00000303979 915 ntBASIC20.15■□□□□ 0.82
CD58P19256 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.15■□□□□ 0.82
CD58P19256 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD58P19256 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.15■□□□□ 0.82
CD58P19256 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD58P19256 AP003041.3-201ENST00000527151 707 ntBASIC20.15■□□□□ 0.82
CD58P19256 EGLN1P1-201ENST00000531623 762 ntBASIC20.15■□□□□ 0.82
CD58P19256 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CD58P19256 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.15■□□□□ 0.82
CD58P19256 AC116562.4-202ENST00000641738 218 ntBASIC20.15■□□□□ 0.82
CD58P19256 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD58P19256 RCC2P3-201ENST00000418112 1537 ntBASIC20.15■□□□□ 0.82
CD58P19256 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD58P19256 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CD58P19256 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.15■□□□□ 0.82
CD58P19256 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CD58P19256 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD58P19256 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
CD58P19256 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD58P19256 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD58P19256 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CD58P19256 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD58P19256 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.15■□□□□ 0.82
CD58P19256 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD58P19256 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.82
CD58P19256 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CD58P19256 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.14■□□□□ 0.81
CD58P19256 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CD58P19256 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CD58P19256 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.14■□□□□ 0.81
CD58P19256 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CD58P19256 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.14■□□□□ 0.81
CD58P19256 GPAT2P1-201ENST00000444924 1672 ntBASIC20.14■□□□□ 0.81
CD58P19256 ECEL1P2-202ENST00000465689 757 ntBASIC20.14■□□□□ 0.81
CD58P19256 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.14■□□□□ 0.81
CD58P19256 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CD58P19256 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.14■□□□□ 0.81
CD58P19256 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
CD58P19256 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CD58P19256 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CD58P19256 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CD58P19256 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.14■□□□□ 0.81
CD58P19256 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CD58P19256 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
CD58P19256 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CD58P19256 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD58P19256 AC092338.2-201ENST00000568827 1415 ntBASIC20.13■□□□□ 0.81
CD58P19256 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD58P19256 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD58P19256 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CD58P19256 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD58P19256 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD58P19256 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.13■□□□□ 0.81
CD58P19256 AC007663.1-201ENST00000438948 1240 ntBASIC20.13■□□□□ 0.81
CD58P19256 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.13■□□□□ 0.81
CD58P19256 TSPY17P-201ENST00000450329 467 ntBASIC20.13■□□□□ 0.81
CD58P19256 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD58P19256 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD58P19256 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CD58P19256 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CD58P19256 AL353719.1-201ENST00000566847 864 ntBASIC20.13■□□□□ 0.81
CD58P19256 MIR4674-201ENST00000582457 87 ntBASIC20.13■□□□□ 0.81
CD58P19256 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD58P19256 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.13■□□□□ 0.81
CD58P19256 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.13■□□□□ 0.81
CD58P19256 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CD58P19256 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CD58P19256 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD58P19256 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD58P19256 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD58P19256 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.13■□□□□ 0.81
CD58P19256 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CD58P19256 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CD58P19256 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CD58P19256 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CD58P19256 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CD58P19256 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CD58P19256 KRT8P32-201ENST00000512863 1461 ntBASIC20.12■□□□□ 0.81
CD58P19256 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CD58P19256 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CD58P19256 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
CD58P19256 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.12■□□□□ 0.81
CD58P19256 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CD58P19256 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CD58P19256 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.12■□□□□ 0.81
CD58P19256 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.12■□□□□ 0.81
CD58P19256 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.12■□□□□ 0.81
CD58P19256 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms