Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 AC006116.8-202ENST00000587620 1550 ntBASIC19.54■□□□□ 0.72
H2AFXP16104 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
H2AFXP16104 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
H2AFXP16104 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
H2AFXP16104 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.54■□□□□ 0.72
H2AFXP16104 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.54■□□□□ 0.72
H2AFXP16104 MCRIP2P1-201ENST00000394346 511 ntBASIC19.54■□□□□ 0.72
H2AFXP16104 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
H2AFXP16104 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
H2AFXP16104 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.54■□□□□ 0.72
H2AFXP16104 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.54■□□□□ 0.72
H2AFXP16104 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
H2AFXP16104 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.54■□□□□ 0.72
H2AFXP16104 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
H2AFXP16104 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
H2AFXP16104 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.54■□□□□ 0.72
H2AFXP16104 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
H2AFXP16104 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.54■□□□□ 0.72
H2AFXP16104 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
H2AFXP16104 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.54■□□□□ 0.72
H2AFXP16104 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.54■□□□□ 0.72
H2AFXP16104 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
H2AFXP16104 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
H2AFXP16104 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.53■□□□□ 0.72
H2AFXP16104 MTMR9LP-203ENST00000426597 1545 ntBASIC19.53■□□□□ 0.72
H2AFXP16104 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H2AFXP16104 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
H2AFXP16104 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.53■□□□□ 0.72
H2AFXP16104 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
H2AFXP16104 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
H2AFXP16104 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H2AFXP16104 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H2AFXP16104 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
H2AFXP16104 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
H2AFXP16104 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
H2AFXP16104 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
H2AFXP16104 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
H2AFXP16104 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
H2AFXP16104 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
H2AFXP16104 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
H2AFXP16104 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.52■□□□□ 0.72
H2AFXP16104 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
H2AFXP16104 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
H2AFXP16104 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.52■□□□□ 0.72
H2AFXP16104 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
H2AFXP16104 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
H2AFXP16104 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
H2AFXP16104 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
H2AFXP16104 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.52■□□□□ 0.72
H2AFXP16104 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
H2AFXP16104 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
H2AFXP16104 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.52■□□□□ 0.72
H2AFXP16104 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.52■□□□□ 0.72
H2AFXP16104 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
H2AFXP16104 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
H2AFXP16104 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.52■□□□□ 0.72
H2AFXP16104 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.52■□□□□ 0.72
H2AFXP16104 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
H2AFXP16104 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
H2AFXP16104 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
H2AFXP16104 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.52■□□□□ 0.72
H2AFXP16104 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
H2AFXP16104 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
H2AFXP16104 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
H2AFXP16104 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.52■□□□□ 0.71
H2AFXP16104 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
H2AFXP16104 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.52■□□□□ 0.71
H2AFXP16104 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.52■□□□□ 0.71
H2AFXP16104 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
H2AFXP16104 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.52■□□□□ 0.71
H2AFXP16104 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
H2AFXP16104 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H2AFXP16104 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H2AFXP16104 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
H2AFXP16104 PCDHB19P-201ENST00000570871 2371 ntBASIC19.51■□□□□ 0.71
H2AFXP16104 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.51■□□□□ 0.71
H2AFXP16104 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
H2AFXP16104 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H2AFXP16104 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
H2AFXP16104 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
H2AFXP16104 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
H2AFXP16104 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H2AFXP16104 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H2AFXP16104 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
H2AFXP16104 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.51■□□□□ 0.71
H2AFXP16104 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.51■□□□□ 0.71
H2AFXP16104 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.51■□□□□ 0.71
H2AFXP16104 AC100791.3-201ENST00000617619 330 ntBASIC19.51■□□□□ 0.71
H2AFXP16104 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H2AFXP16104 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
H2AFXP16104 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
H2AFXP16104 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.51■□□□□ 0.71
H2AFXP16104 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
H2AFXP16104 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
H2AFXP16104 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.51■□□□□ 0.71
H2AFXP16104 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
H2AFXP16104 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H2AFXP16104 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.5■□□□□ 0.71
H2AFXP16104 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
H2AFXP16104 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms