Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AC011298.2-201ENST00000617989 482 ntBASIC19.74■□□□□ 0.75
RARAP10276 AC130371.2-201ENST00000619443 611 ntBASIC19.74■□□□□ 0.75
RARAP10276 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.74■□□□□ 0.75
RARAP10276 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RARAP10276 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RARAP10276 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.74■□□□□ 0.75
RARAP10276 AL135905.2-201ENST00000584934 1404 ntBASIC19.74■□□□□ 0.75
RARAP10276 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RARAP10276 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.74■□□□□ 0.75
RARAP10276 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RARAP10276 LTB4R2-202ENST00000528054 3092 ntBASIC19.74■□□□□ 0.75
RARAP10276 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RARAP10276 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
RARAP10276 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RARAP10276 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RARAP10276 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RARAP10276 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RARAP10276 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RARAP10276 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RARAP10276 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.73■□□□□ 0.75
RARAP10276 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.73■□□□□ 0.75
RARAP10276 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RARAP10276 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RARAP10276 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.73■□□□□ 0.75
RARAP10276 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RARAP10276 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.73■□□□□ 0.75
RARAP10276 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.73■□□□□ 0.75
RARAP10276 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.73■□□□□ 0.75
RARAP10276 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.73■□□□□ 0.75
RARAP10276 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.73■□□□□ 0.75
RARAP10276 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.73■□□□□ 0.75
RARAP10276 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.73■□□□□ 0.75
RARAP10276 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RARAP10276 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RARAP10276 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RARAP10276 AIRN-201ENST00000601203 4374 ntBASIC19.73■□□□□ 0.75
RARAP10276 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.73■□□□□ 0.75
RARAP10276 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.73■□□□□ 0.75
RARAP10276 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RARAP10276 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RARAP10276 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RARAP10276 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RARAP10276 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.72■□□□□ 0.75
RARAP10276 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RARAP10276 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.72■□□□□ 0.75
RARAP10276 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.72■□□□□ 0.75
RARAP10276 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.72■□□□□ 0.75
RARAP10276 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
RARAP10276 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RARAP10276 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.72■□□□□ 0.75
RARAP10276 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.72■□□□□ 0.75
RARAP10276 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RARAP10276 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RARAP10276 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RARAP10276 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RARAP10276 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RARAP10276 MESTP1-201ENST00000404287 994 ntBASIC19.72■□□□□ 0.75
RARAP10276 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.72■□□□□ 0.75
RARAP10276 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.72■□□□□ 0.75
RARAP10276 B3GAT3P1-201ENST00000471720 806 ntBASIC19.72■□□□□ 0.75
RARAP10276 PRSS44-201ENST00000515154 1146 ntBASIC19.72■□□□□ 0.75
RARAP10276 CD177P1-201ENST00000606252 935 ntBASIC19.72■□□□□ 0.75
RARAP10276 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RARAP10276 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RARAP10276 MIR6786-201ENST00000616843 113 ntBASIC19.72■□□□□ 0.75
RARAP10276 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RARAP10276 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RARAP10276 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.72■□□□□ 0.75
RARAP10276 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.72■□□□□ 0.75
RARAP10276 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RARAP10276 AC020763.4-201ENST00000623414 4170 ntBASIC19.72■□□□□ 0.75
RARAP10276 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.72■□□□□ 0.75
RARAP10276 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RARAP10276 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.71■□□□□ 0.75
RARAP10276 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RARAP10276 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RARAP10276 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RARAP10276 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RARAP10276 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RARAP10276 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RARAP10276 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RARAP10276 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RARAP10276 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RARAP10276 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RARAP10276 RPS2P55-201ENST00000397318 883 ntBASIC19.71■□□□□ 0.75
RARAP10276 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RARAP10276 AC107956.1-201ENST00000494359 873 ntBASIC19.71■□□□□ 0.75
RARAP10276 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.71■□□□□ 0.75
RARAP10276 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.71■□□□□ 0.75
RARAP10276 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.71■□□□□ 0.75
RARAP10276 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RARAP10276 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RARAP10276 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RARAP10276 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RARAP10276 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RARAP10276 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.71■□□□□ 0.75
RARAP10276 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RARAP10276 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.71■□□□□ 0.75
RARAP10276 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.71■□□□□ 0.75
RARAP10276 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms