Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTSBP07858 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTSBP07858 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.8■□□□□ 0.44
CTSBP07858 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTSBP07858 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTSBP07858 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTSBP07858 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTSBP07858 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTSBP07858 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.8■□□□□ 0.44
CTSBP07858 SEC1P-202ENST00000473944 940 ntBASIC17.8■□□□□ 0.44
CTSBP07858 AC092597.1-201ENST00000487352 616 ntBASIC17.8■□□□□ 0.44
CTSBP07858 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CTSBP07858 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.8■□□□□ 0.44
CTSBP07858 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTSBP07858 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.8■□□□□ 0.44
CTSBP07858 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTSBP07858 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
CTSBP07858 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
CTSBP07858 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.8■□□□□ 0.44
CTSBP07858 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTSBP07858 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTSBP07858 MTMR9LP-203ENST00000426597 1545 ntBASIC17.8■□□□□ 0.44
CTSBP07858 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.8■□□□□ 0.44
CTSBP07858 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTSBP07858 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTSBP07858 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTSBP07858 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTSBP07858 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CTSBP07858 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTSBP07858 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.79■□□□□ 0.44
CTSBP07858 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTSBP07858 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CTSBP07858 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTSBP07858 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTSBP07858 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.79■□□□□ 0.44
CTSBP07858 MIR564-202ENST00000385049 94 ntBASIC17.79■□□□□ 0.44
CTSBP07858 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTSBP07858 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CTSBP07858 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTSBP07858 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.79■□□□□ 0.44
CTSBP07858 AC112907.2-201ENST00000448639 330 ntBASIC17.79■□□□□ 0.44
CTSBP07858 HOMER2P1-201ENST00000455653 964 ntBASIC17.79■□□□□ 0.44
CTSBP07858 AL671277.2-201ENST00000458060 996 ntBASIC17.79■□□□□ 0.44
CTSBP07858 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.79■□□□□ 0.44
CTSBP07858 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CTSBP07858 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CTSBP07858 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.79■□□□□ 0.44
CTSBP07858 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.79■□□□□ 0.44
CTSBP07858 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTSBP07858 AC099343.3-201ENST00000605834 2503 ntBASIC17.79■□□□□ 0.44
CTSBP07858 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTSBP07858 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTSBP07858 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTSBP07858 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
CTSBP07858 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.79■□□□□ 0.44
CTSBP07858 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTSBP07858 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CTSBP07858 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTSBP07858 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CTSBP07858 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTSBP07858 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTSBP07858 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.78■□□□□ 0.44
CTSBP07858 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.78■□□□□ 0.44
CTSBP07858 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.78■□□□□ 0.44
CTSBP07858 HEIH-201ENST00000623091 1652 ntBASIC17.78■□□□□ 0.44
CTSBP07858 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTSBP07858 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTSBP07858 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.78■□□□□ 0.44
CTSBP07858 AL357033.4-201ENST00000617703 1807 ntBASIC17.78■□□□□ 0.44
CTSBP07858 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTSBP07858 SPDYE13P-201ENST00000445314 798 ntBASIC17.78■□□□□ 0.44
CTSBP07858 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTSBP07858 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTSBP07858 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.78■□□□□ 0.44
CTSBP07858 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CTSBP07858 AC083849.1-201ENST00000615227 514 ntBASIC17.78■□□□□ 0.44
CTSBP07858 AL358472.4-201ENST00000633140 710 ntBASIC17.78■□□□□ 0.44
CTSBP07858 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.78■□□□□ 0.44
CTSBP07858 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTSBP07858 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTSBP07858 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.78■□□□□ 0.44
CTSBP07858 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTSBP07858 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTSBP07858 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTSBP07858 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTSBP07858 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTSBP07858 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CTSBP07858 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTSBP07858 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.77■□□□□ 0.44
CTSBP07858 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTSBP07858 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CTSBP07858 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTSBP07858 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTSBP07858 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTSBP07858 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTSBP07858 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CTSBP07858 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.77■□□□□ 0.44
CTSBP07858 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CTSBP07858 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.77■□□□□ 0.44
CTSBP07858 STARP1-201ENST00000397973 869 ntBASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms