Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHRNA1P02708 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CHRNA1P02708 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHRNA1P02708 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHRNA1P02708 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHRNA1P02708 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHRNA1P02708 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHRNA1P02708 AC006333.2-201ENST00000607957 2099 ntBASIC20.44■□□□□ 0.86
CHRNA1P02708 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.44■□□□□ 0.86
CHRNA1P02708 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHRNA1P02708 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHRNA1P02708 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CHRNA1P02708 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHRNA1P02708 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.44■□□□□ 0.86
CHRNA1P02708 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHRNA1P02708 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHRNA1P02708 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
CHRNA1P02708 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CHRNA1P02708 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.44■□□□□ 0.86
CHRNA1P02708 AC246785.2-201ENST00000432512 513 ntBASIC20.44■□□□□ 0.86
CHRNA1P02708 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHRNA1P02708 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHRNA1P02708 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.44■□□□□ 0.86
CHRNA1P02708 TPSP2-201ENST00000561760 610 ntBASIC20.44■□□□□ 0.86
CHRNA1P02708 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.44■□□□□ 0.86
CHRNA1P02708 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.44■□□□□ 0.86
CHRNA1P02708 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHRNA1P02708 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CHRNA1P02708 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CHRNA1P02708 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CHRNA1P02708 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHRNA1P02708 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHRNA1P02708 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHRNA1P02708 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.43■□□□□ 0.86
CHRNA1P02708 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHRNA1P02708 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CHRNA1P02708 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHRNA1P02708 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHRNA1P02708 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHRNA1P02708 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHRNA1P02708 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CHRNA1P02708 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.43■□□□□ 0.86
CHRNA1P02708 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHRNA1P02708 AL845331.1-201ENST00000424978 1190 ntBASIC20.43■□□□□ 0.86
CHRNA1P02708 DRAXINP1-201ENST00000437611 948 ntBASIC20.43■□□□□ 0.86
CHRNA1P02708 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.43■□□□□ 0.86
CHRNA1P02708 NUS1P1-201ENST00000446295 882 ntBASIC20.43■□□□□ 0.86
CHRNA1P02708 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.43■□□□□ 0.86
CHRNA1P02708 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.43■□□□□ 0.86
CHRNA1P02708 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.43■□□□□ 0.86
CHRNA1P02708 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.43■□□□□ 0.86
CHRNA1P02708 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHRNA1P02708 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.43■□□□□ 0.86
CHRNA1P02708 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHRNA1P02708 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHRNA1P02708 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.43■□□□□ 0.86
CHRNA1P02708 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHRNA1P02708 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHRNA1P02708 AC141586.3-201ENST00000562166 1838 ntBASIC20.43■□□□□ 0.86
CHRNA1P02708 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHRNA1P02708 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHRNA1P02708 FP475955.4-201ENST00000623131 1990 ntBASIC20.43■□□□□ 0.86
CHRNA1P02708 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHRNA1P02708 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.43■□□□□ 0.86
CHRNA1P02708 Z83836.1-201ENST00000624605 1642 ntBASIC20.42■□□□□ 0.86
CHRNA1P02708 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
CHRNA1P02708 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHRNA1P02708 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHRNA1P02708 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.42■□□□□ 0.86
CHRNA1P02708 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
CHRNA1P02708 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHRNA1P02708 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CHRNA1P02708 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHRNA1P02708 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHRNA1P02708 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.42■□□□□ 0.86
CHRNA1P02708 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHRNA1P02708 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.42■□□□□ 0.86
CHRNA1P02708 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.42■□□□□ 0.86
CHRNA1P02708 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHRNA1P02708 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.42■□□□□ 0.86
CHRNA1P02708 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.42■□□□□ 0.86
CHRNA1P02708 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHRNA1P02708 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.42■□□□□ 0.86
CHRNA1P02708 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.42■□□□□ 0.86
CHRNA1P02708 AC034236.2-201ENST00000606662 1610 ntBASIC20.42■□□□□ 0.86
CHRNA1P02708 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNA1P02708 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNA1P02708 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNA1P02708 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNA1P02708 PVRIG2P-201ENST00000435460 978 ntBASIC20.41■□□□□ 0.86
CHRNA1P02708 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNA1P02708 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.41■□□□□ 0.86
CHRNA1P02708 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.41■□□□□ 0.86
CHRNA1P02708 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.41■□□□□ 0.86
CHRNA1P02708 AC111152.3-201ENST00000569699 673 ntBASIC20.41■□□□□ 0.86
CHRNA1P02708 AC005332.3-201ENST00000589904 676 ntBASIC20.41■□□□□ 0.86
CHRNA1P02708 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CHRNA1P02708 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNA1P02708 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNA1P02708 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms