Protein–RNA interactions for Protein: O95970

LGI1, Leucine-rich glioma-inactivated protein 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1O95970 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
LGI1O95970 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LGI1O95970 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.37■□□□□ 0.37
LGI1O95970 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.37■□□□□ 0.37
LGI1O95970 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LGI1O95970 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.37■□□□□ 0.37
LGI1O95970 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
LGI1O95970 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LGI1O95970 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.37■□□□□ 0.37
LGI1O95970 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.37■□□□□ 0.37
LGI1O95970 KRT8P32-201ENST00000512863 1461 ntBASIC17.37■□□□□ 0.37
LGI1O95970 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.37■□□□□ 0.37
LGI1O95970 MTMR9LP-203ENST00000426597 1545 ntBASIC17.37■□□□□ 0.37
LGI1O95970 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LGI1O95970 AC020763.4-201ENST00000623414 4170 ntBASIC17.36■□□□□ 0.37
LGI1O95970 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LGI1O95970 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.36■□□□□ 0.37
LGI1O95970 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LGI1O95970 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LGI1O95970 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.36■□□□□ 0.37
LGI1O95970 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LGI1O95970 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LGI1O95970 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.36■□□□□ 0.37
LGI1O95970 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LGI1O95970 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LGI1O95970 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.36■□□□□ 0.37
LGI1O95970 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LGI1O95970 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LGI1O95970 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LGI1O95970 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LGI1O95970 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.36■□□□□ 0.37
LGI1O95970 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LGI1O95970 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.36■□□□□ 0.37
LGI1O95970 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.36■□□□□ 0.37
LGI1O95970 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LGI1O95970 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LGI1O95970 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.36■□□□□ 0.37
LGI1O95970 KRT8P3-201ENST00000519669 1449 ntBASIC17.36■□□□□ 0.37
LGI1O95970 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
LGI1O95970 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LGI1O95970 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LGI1O95970 PCDHB18P-201ENST00000524813 2368 ntBASIC17.36■□□□□ 0.37
LGI1O95970 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LGI1O95970 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LGI1O95970 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
LGI1O95970 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LGI1O95970 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.35■□□□□ 0.37
LGI1O95970 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LGI1O95970 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LGI1O95970 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LGI1O95970 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LGI1O95970 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LGI1O95970 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LGI1O95970 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
LGI1O95970 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LGI1O95970 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.35■□□□□ 0.37
LGI1O95970 AC098590.1-201ENST00000468126 897 ntBASIC17.35■□□□□ 0.37
LGI1O95970 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.35■□□□□ 0.37
LGI1O95970 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.35■□□□□ 0.37
LGI1O95970 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
LGI1O95970 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.35■□□□□ 0.37
LGI1O95970 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LGI1O95970 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.35■□□□□ 0.37
LGI1O95970 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LGI1O95970 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LGI1O95970 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LGI1O95970 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LGI1O95970 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
LGI1O95970 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LGI1O95970 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
LGI1O95970 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
LGI1O95970 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.35■□□□□ 0.37
LGI1O95970 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LGI1O95970 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LGI1O95970 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
LGI1O95970 NOC2LP2-201ENST00000407594 1944 ntBASIC17.35■□□□□ 0.37
LGI1O95970 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LGI1O95970 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.35■□□□□ 0.37
LGI1O95970 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.35■□□□□ 0.37
LGI1O95970 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.35■□□□□ 0.37
LGI1O95970 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LGI1O95970 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LGI1O95970 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LGI1O95970 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LGI1O95970 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LGI1O95970 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LGI1O95970 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LGI1O95970 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LGI1O95970 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LGI1O95970 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.34■□□□□ 0.37
LGI1O95970 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LGI1O95970 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LGI1O95970 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LGI1O95970 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LGI1O95970 KSR1P1-201ENST00000446298 240 ntBASIC17.34■□□□□ 0.37
LGI1O95970 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LGI1O95970 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.34■□□□□ 0.37
LGI1O95970 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.34■□□□□ 0.37
LGI1O95970 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
LGI1O95970 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms