Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.79■□□□□ 0.76
RTN3O95197 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RTN3O95197 AC011558.1-201ENST00000623459 338 ntBASIC19.79■□□□□ 0.76
RTN3O95197 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTN3O95197 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTN3O95197 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.79■□□□□ 0.76
RTN3O95197 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTN3O95197 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTN3O95197 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RTN3O95197 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTN3O95197 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTN3O95197 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTN3O95197 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.79■□□□□ 0.76
RTN3O95197 AC098818.2-201ENST00000564925 2320 ntBASIC19.79■□□□□ 0.76
RTN3O95197 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RTN3O95197 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RTN3O95197 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.78■□□□□ 0.76
RTN3O95197 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTN3O95197 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RTN3O95197 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTN3O95197 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTN3O95197 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTN3O95197 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RTN3O95197 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTN3O95197 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTN3O95197 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.78■□□□□ 0.76
RTN3O95197 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.78■□□□□ 0.76
RTN3O95197 ARMC10P1-201ENST00000313754 855 ntBASIC19.78■□□□□ 0.76
RTN3O95197 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTN3O95197 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.78■□□□□ 0.76
RTN3O95197 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RTN3O95197 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RTN3O95197 NTF6B-201ENST00000591913 560 ntBASIC19.78■□□□□ 0.76
RTN3O95197 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.78■□□□□ 0.76
RTN3O95197 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RTN3O95197 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTN3O95197 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.78■□□□□ 0.76
RTN3O95197 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTN3O95197 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.78■□□□□ 0.76
RTN3O95197 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTN3O95197 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTN3O95197 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTN3O95197 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
RTN3O95197 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTN3O95197 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTN3O95197 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTN3O95197 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RTN3O95197 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RTN3O95197 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTN3O95197 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RTN3O95197 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.77■□□□□ 0.76
RTN3O95197 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTN3O95197 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTN3O95197 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTN3O95197 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTN3O95197 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.77■□□□□ 0.76
RTN3O95197 FAM8A6P-201ENST00000407496 1135 ntBASIC19.77■□□□□ 0.76
RTN3O95197 AC092647.4-201ENST00000457211 535 ntBASIC19.77■□□□□ 0.76
RTN3O95197 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.77■□□□□ 0.76
RTN3O95197 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.77■□□□□ 0.76
RTN3O95197 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.77■□□□□ 0.76
RTN3O95197 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RTN3O95197 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.77■□□□□ 0.76
RTN3O95197 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.77■□□□□ 0.76
RTN3O95197 MIR3180-5-201ENST00000583743 153 ntBASIC19.77■□□□□ 0.76
RTN3O95197 AL023973.1-201ENST00000624619 620 ntBASIC19.77■□□□□ 0.76
RTN3O95197 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.77■□□□□ 0.76
RTN3O95197 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
RTN3O95197 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RTN3O95197 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.77■□□□□ 0.75
RTN3O95197 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RTN3O95197 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RTN3O95197 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
RTN3O95197 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN3O95197 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN3O95197 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN3O95197 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN3O95197 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTN3O95197 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RTN3O95197 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RTN3O95197 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.76■□□□□ 0.75
RTN3O95197 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.76■□□□□ 0.75
RTN3O95197 AL512353.2-201ENST00000448759 1962 ntBASIC19.76■□□□□ 0.75
RTN3O95197 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTN3O95197 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN3O95197 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN3O95197 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN3O95197 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.76■□□□□ 0.75
RTN3O95197 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTN3O95197 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN3O95197 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RTN3O95197 HOMER2P1-201ENST00000455653 964 ntBASIC19.76■□□□□ 0.75
RTN3O95197 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.76■□□□□ 0.75
RTN3O95197 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTN3O95197 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RTN3O95197 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN3O95197 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTN3O95197 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN3O95197 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN3O95197 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms