Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.34■□□□□ 0.37
NKX2-2O95096 MIR4674-201ENST00000582457 87 ntBASIC17.34■□□□□ 0.37
NKX2-2O95096 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.34■□□□□ 0.37
NKX2-2O95096 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.34■□□□□ 0.37
NKX2-2O95096 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
NKX2-2O95096 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.34■□□□□ 0.37
NKX2-2O95096 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.34■□□□□ 0.37
NKX2-2O95096 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NKX2-2O95096 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
NKX2-2O95096 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NKX2-2O95096 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
NKX2-2O95096 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NKX2-2O95096 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NKX2-2O95096 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NKX2-2O95096 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NKX2-2O95096 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NKX2-2O95096 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NKX2-2O95096 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.37
NKX2-2O95096 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.33■□□□□ 0.37
NKX2-2O95096 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NKX2-2O95096 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.33■□□□□ 0.36
NKX2-2O95096 TSPY14P-201ENST00000303979 915 ntBASIC17.33■□□□□ 0.36
NKX2-2O95096 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NKX2-2O95096 MIR564-202ENST00000385049 94 ntBASIC17.33■□□□□ 0.36
NKX2-2O95096 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.33■□□□□ 0.36
NKX2-2O95096 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NKX2-2O95096 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.33■□□□□ 0.36
NKX2-2O95096 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.33■□□□□ 0.36
NKX2-2O95096 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.33■□□□□ 0.36
NKX2-2O95096 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
NKX2-2O95096 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
NKX2-2O95096 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.33■□□□□ 0.36
NKX2-2O95096 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
NKX2-2O95096 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.33■□□□□ 0.36
NKX2-2O95096 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.33■□□□□ 0.36
NKX2-2O95096 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NKX2-2O95096 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.33■□□□□ 0.36
NKX2-2O95096 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NKX2-2O95096 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
NKX2-2O95096 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.33■□□□□ 0.36
NKX2-2O95096 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NKX2-2O95096 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.32■□□□□ 0.36
NKX2-2O95096 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
NKX2-2O95096 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NKX2-2O95096 KRT8P45-201ENST00000414328 1447 ntBASIC17.32■□□□□ 0.36
NKX2-2O95096 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NKX2-2O95096 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NKX2-2O95096 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.32■□□□□ 0.36
NKX2-2O95096 MMP23A-201ENST00000234610 1017 ntBASIC17.32■□□□□ 0.36
NKX2-2O95096 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
NKX2-2O95096 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NKX2-2O95096 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.32■□□□□ 0.36
NKX2-2O95096 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.32■□□□□ 0.36
NKX2-2O95096 AP003041.3-201ENST00000527151 707 ntBASIC17.32■□□□□ 0.36
NKX2-2O95096 EGLN1P1-201ENST00000531623 762 ntBASIC17.32■□□□□ 0.36
NKX2-2O95096 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.32■□□□□ 0.36
NKX2-2O95096 MYC-208ENST00000641036 567 ntBASIC17.32■□□□□ 0.36
NKX2-2O95096 AC116562.4-202ENST00000641738 218 ntBASIC17.32■□□□□ 0.36
NKX2-2O95096 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NKX2-2O95096 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NKX2-2O95096 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NKX2-2O95096 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NKX2-2O95096 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX2-2O95096 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NKX2-2O95096 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX2-2O95096 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX2-2O95096 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX2-2O95096 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
NKX2-2O95096 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NKX2-2O95096 AC112777.1-201ENST00000540175 1423 ntBASIC17.31■□□□□ 0.36
NKX2-2O95096 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NKX2-2O95096 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX2-2O95096 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.31■□□□□ 0.36
NKX2-2O95096 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NKX2-2O95096 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX2-2O95096 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX2-2O95096 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
NKX2-2O95096 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX2-2O95096 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.31■□□□□ 0.36
NKX2-2O95096 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.31■□□□□ 0.36
NKX2-2O95096 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.31■□□□□ 0.36
NKX2-2O95096 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.31■□□□□ 0.36
NKX2-2O95096 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NKX2-2O95096 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NKX2-2O95096 KRT18P41-201ENST00000518924 1277 ntBASIC17.31■□□□□ 0.36
NKX2-2O95096 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.31■□□□□ 0.36
NKX2-2O95096 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NKX2-2O95096 MIR3180-5-201ENST00000583743 153 ntBASIC17.31■□□□□ 0.36
NKX2-2O95096 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NKX2-2O95096 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
NKX2-2O95096 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX2-2O95096 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX2-2O95096 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX2-2O95096 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX2-2O95096 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX2-2O95096 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX2-2O95096 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NKX2-2O95096 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NKX2-2O95096 KRT8P9-201ENST00000558927 1449 ntBASIC17.3■□□□□ 0.36
NKX2-2O95096 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms