Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.34■□□□□ 0.05
CLN5O75503 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLN5O75503 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.34■□□□□ 0.05
CLN5O75503 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CLN5O75503 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CLN5O75503 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLN5O75503 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLN5O75503 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLN5O75503 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLN5O75503 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLN5O75503 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
CLN5O75503 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLN5O75503 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLN5O75503 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLN5O75503 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLN5O75503 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLN5O75503 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLN5O75503 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.33■□□□□ 0.04
CLN5O75503 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLN5O75503 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLN5O75503 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CLN5O75503 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLN5O75503 BX276092.2-201ENST00000417668 665 ntBASIC15.33■□□□□ 0.04
CLN5O75503 CDCA4P2-201ENST00000441182 718 ntBASIC15.33■□□□□ 0.04
CLN5O75503 AL137784.2-201ENST00000607332 1000 ntBASIC15.33■□□□□ 0.04
CLN5O75503 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLN5O75503 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLN5O75503 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLN5O75503 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLN5O75503 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CLN5O75503 CROCCP3-202ENST00000420820 1947 ntBASIC15.33■□□□□ 0.04
CLN5O75503 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLN5O75503 AC018553.1-201ENST00000616682 1458 ntBASIC15.33■□□□□ 0.04
CLN5O75503 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLN5O75503 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLN5O75503 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CLN5O75503 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC15.33■□□□□ 0.04
CLN5O75503 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLN5O75503 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CLN5O75503 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLN5O75503 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLN5O75503 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLN5O75503 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CLN5O75503 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLN5O75503 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLN5O75503 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
CLN5O75503 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
CLN5O75503 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
CLN5O75503 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLN5O75503 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CLN5O75503 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CLN5O75503 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLN5O75503 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
CLN5O75503 AL390719.1-204ENST00000412397 1219 ntBASIC15.32■□□□□ 0.04
CLN5O75503 GLI3-203ENST00000437480 451 ntTSL 2 BASIC15.32■□□□□ 0.04
CLN5O75503 IKBKGP1-201ENST00000612193 1073 ntBASIC15.32■□□□□ 0.04
CLN5O75503 AL050303.2-201ENST00000619798 666 ntBASIC15.32■□□□□ 0.04
CLN5O75503 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC15.32■□□□□ 0.04
CLN5O75503 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC15.32■□□□□ 0.04
CLN5O75503 MARS-234ENST00000630571 216 ntTSL 5 BASIC15.32■□□□□ 0.04
CLN5O75503 MARS-235ENST00000630803 183 ntTSL 3 BASIC15.32■□□□□ 0.04
CLN5O75503 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CLN5O75503 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLN5O75503 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLN5O75503 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLN5O75503 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC15.32■□□□□ 0.04
CLN5O75503 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLN5O75503 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLN5O75503 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLN5O75503 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
CLN5O75503 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC15.32■□□□□ 0.04
CLN5O75503 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
CLN5O75503 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC15.32■□□□□ 0.04
CLN5O75503 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLN5O75503 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLN5O75503 AC116351.2-201ENST00000606540 1585 ntBASIC15.32■□□□□ 0.04
CLN5O75503 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLN5O75503 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC15.32■□□□□ 0.04
CLN5O75503 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CLN5O75503 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLN5O75503 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLN5O75503 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC15.31■□□□□ 0.04
CLN5O75503 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLN5O75503 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLN5O75503 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC15.31■□□□□ 0.04
CLN5O75503 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC15.31■□□□□ 0.04
CLN5O75503 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
CLN5O75503 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLN5O75503 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC15.31■□□□□ 0.04
CLN5O75503 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLN5O75503 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLN5O75503 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.31■□□□□ 0.04
CLN5O75503 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.31■□□□□ 0.04
CLN5O75503 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CLN5O75503 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
CLN5O75503 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLN5O75503 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLN5O75503 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLN5O75503 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC15.31■□□□□ 0.04
CLN5O75503 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms