Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.23■□□□□ 0.51
GFRA3O60609 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GFRA3O60609 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GFRA3O60609 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GFRA3O60609 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GFRA3O60609 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GFRA3O60609 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
GFRA3O60609 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.23■□□□□ 0.51
GFRA3O60609 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GFRA3O60609 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GFRA3O60609 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GFRA3O60609 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.23■□□□□ 0.51
GFRA3O60609 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.23■□□□□ 0.51
GFRA3O60609 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.23■□□□□ 0.51
GFRA3O60609 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.23■□□□□ 0.51
GFRA3O60609 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.23■□□□□ 0.51
GFRA3O60609 AC104390.1-201ENST00000555663 520 ntBASIC18.23■□□□□ 0.51
GFRA3O60609 DUX4L17-201ENST00000557360 1267 ntBASIC18.23■□□□□ 0.51
GFRA3O60609 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.23■□□□□ 0.51
GFRA3O60609 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
GFRA3O60609 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
GFRA3O60609 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.23■□□□□ 0.51
GFRA3O60609 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GFRA3O60609 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GFRA3O60609 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
GFRA3O60609 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GFRA3O60609 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
GFRA3O60609 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GFRA3O60609 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
GFRA3O60609 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.22■□□□□ 0.51
GFRA3O60609 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GFRA3O60609 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
GFRA3O60609 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.22■□□□□ 0.51
GFRA3O60609 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.22■□□□□ 0.51
GFRA3O60609 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GFRA3O60609 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.22■□□□□ 0.51
GFRA3O60609 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.22■□□□□ 0.51
GFRA3O60609 ALG1L5P-201ENST00000482043 771 ntBASIC18.22■□□□□ 0.51
GFRA3O60609 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GFRA3O60609 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.22■□□□□ 0.51
GFRA3O60609 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.22■□□□□ 0.51
GFRA3O60609 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.22■□□□□ 0.51
GFRA3O60609 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.22■□□□□ 0.51
GFRA3O60609 AC093028.1-201ENST00000622998 982 ntBASIC18.22■□□□□ 0.51
GFRA3O60609 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
GFRA3O60609 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GFRA3O60609 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GFRA3O60609 FP700111.2-201ENST00000619190 1892 ntBASIC18.22■□□□□ 0.51
GFRA3O60609 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GFRA3O60609 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GFRA3O60609 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
GFRA3O60609 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
GFRA3O60609 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
GFRA3O60609 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GFRA3O60609 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GFRA3O60609 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GFRA3O60609 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GFRA3O60609 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GFRA3O60609 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.21■□□□□ 0.51
GFRA3O60609 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.21■□□□□ 0.51
GFRA3O60609 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GFRA3O60609 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.21■□□□□ 0.51
GFRA3O60609 AC105339.3-201ENST00000560043 636 ntBASIC18.21■□□□□ 0.51
GFRA3O60609 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.21■□□□□ 0.51
GFRA3O60609 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.21■□□□□ 0.51
GFRA3O60609 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.21■□□□□ 0.51
GFRA3O60609 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GFRA3O60609 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GFRA3O60609 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GFRA3O60609 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
GFRA3O60609 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
GFRA3O60609 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GFRA3O60609 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GFRA3O60609 AP001271.2-201ENST00000624018 1556 ntBASIC18.21■□□□□ 0.51
GFRA3O60609 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
GFRA3O60609 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
GFRA3O60609 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
GFRA3O60609 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
GFRA3O60609 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.21■□□□□ 0.5
GFRA3O60609 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.21■□□□□ 0.5
GFRA3O60609 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GFRA3O60609 AC233723.2-201ENST00000623798 2106 ntBASIC18.2■□□□□ 0.5
GFRA3O60609 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GFRA3O60609 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.2■□□□□ 0.5
GFRA3O60609 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.2■□□□□ 0.5
GFRA3O60609 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
GFRA3O60609 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.2■□□□□ 0.5
GFRA3O60609 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
GFRA3O60609 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GFRA3O60609 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GFRA3O60609 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.2■□□□□ 0.5
GFRA3O60609 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.2■□□□□ 0.5
GFRA3O60609 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
GFRA3O60609 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
GFRA3O60609 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.2■□□□□ 0.5
GFRA3O60609 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GFRA3O60609 KRT8P7-201ENST00000533003 1432 ntBASIC18.2■□□□□ 0.5
GFRA3O60609 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
GFRA3O60609 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
GFRA3O60609 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms