Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
URB1O60287 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
URB1O60287 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
URB1O60287 TP73-AS1-207ENST00000624167 988 ntBASIC17.72■□□□□ 0.43
URB1O60287 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
URB1O60287 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
URB1O60287 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
URB1O60287 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
URB1O60287 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.72■□□□□ 0.43
URB1O60287 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
URB1O60287 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
URB1O60287 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
URB1O60287 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.72■□□□□ 0.43
URB1O60287 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.72■□□□□ 0.43
URB1O60287 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
URB1O60287 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.72■□□□□ 0.43
URB1O60287 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
URB1O60287 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
URB1O60287 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
URB1O60287 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
URB1O60287 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
URB1O60287 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
URB1O60287 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
URB1O60287 SAPCD2P3-201ENST00000455031 850 ntBASIC17.72■□□□□ 0.43
URB1O60287 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
URB1O60287 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
URB1O60287 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
URB1O60287 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
URB1O60287 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
URB1O60287 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
URB1O60287 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.71■□□□□ 0.43
URB1O60287 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
URB1O60287 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
URB1O60287 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
URB1O60287 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.71■□□□□ 0.43
URB1O60287 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
URB1O60287 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
URB1O60287 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
URB1O60287 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.71■□□□□ 0.43
URB1O60287 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.71■□□□□ 0.43
URB1O60287 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.71■□□□□ 0.43
URB1O60287 AC140113.2-201ENST00000604370 208 ntBASIC17.71■□□□□ 0.43
URB1O60287 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.71■□□□□ 0.43
URB1O60287 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.71■□□□□ 0.43
URB1O60287 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
URB1O60287 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
URB1O60287 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.71■□□□□ 0.43
URB1O60287 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
URB1O60287 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.71■□□□□ 0.43
URB1O60287 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
URB1O60287 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
URB1O60287 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.42
URB1O60287 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
URB1O60287 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
URB1O60287 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.7■□□□□ 0.42
URB1O60287 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.7■□□□□ 0.42
URB1O60287 Z69720.1-201ENST00000601483 472 ntBASIC17.7■□□□□ 0.42
URB1O60287 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.7■□□□□ 0.42
URB1O60287 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.7■□□□□ 0.42
URB1O60287 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
URB1O60287 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.7■□□□□ 0.42
URB1O60287 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
URB1O60287 AC073314.1-201ENST00000568729 2216 ntBASIC17.7■□□□□ 0.42
URB1O60287 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
URB1O60287 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
URB1O60287 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
URB1O60287 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
URB1O60287 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
URB1O60287 AC243591.1-201ENST00000452967 1364 ntBASIC17.7■□□□□ 0.42
URB1O60287 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
URB1O60287 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
URB1O60287 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
URB1O60287 AKR1C7P-201ENST00000305623 895 ntBASIC17.7■□□□□ 0.42
URB1O60287 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.7■□□□□ 0.42
URB1O60287 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.7■□□□□ 0.42
URB1O60287 RNPS1P1-201ENST00000507437 918 ntBASIC17.7■□□□□ 0.42
URB1O60287 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
URB1O60287 AC079602.3-201ENST00000623931 403 ntBASIC17.7■□□□□ 0.42
URB1O60287 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
URB1O60287 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
URB1O60287 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.7■□□□□ 0.42
URB1O60287 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
URB1O60287 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
URB1O60287 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
URB1O60287 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
URB1O60287 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
URB1O60287 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.69■□□□□ 0.42
URB1O60287 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
URB1O60287 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
URB1O60287 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.69■□□□□ 0.42
URB1O60287 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.69■□□□□ 0.42
URB1O60287 AC073648.2-201ENST00000510116 352 ntBASIC17.69■□□□□ 0.42
URB1O60287 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.69■□□□□ 0.42
URB1O60287 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.69■□□□□ 0.42
URB1O60287 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
URB1O60287 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
URB1O60287 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
URB1O60287 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
URB1O60287 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
URB1O60287 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms