Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PEX1O43933 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PEX1O43933 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
PEX1O43933 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PEX1O43933 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PEX1O43933 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PEX1O43933 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PEX1O43933 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PEX1O43933 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PEX1O43933 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PEX1O43933 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.31■□□□□ 0.52
PEX1O43933 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PEX1O43933 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.31■□□□□ 0.52
PEX1O43933 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
PEX1O43933 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PEX1O43933 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PEX1O43933 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PEX1O43933 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.3■□□□□ 0.52
PEX1O43933 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PEX1O43933 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.3■□□□□ 0.52
PEX1O43933 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PEX1O43933 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PEX1O43933 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
PEX1O43933 KRASP1-201ENST00000407852 552 ntBASIC18.3■□□□□ 0.52
PEX1O43933 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.3■□□□□ 0.52
PEX1O43933 AC133681.1-201ENST00000465482 601 ntBASIC18.3■□□□□ 0.52
PEX1O43933 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.3■□□□□ 0.52
PEX1O43933 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.3■□□□□ 0.52
PEX1O43933 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.3■□□□□ 0.52
PEX1O43933 AC139713.2-201ENST00000641328 2723 ntBASIC18.3■□□□□ 0.52
PEX1O43933 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PEX1O43933 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.3■□□□□ 0.52
PEX1O43933 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PEX1O43933 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.29■□□□□ 0.52
PEX1O43933 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PEX1O43933 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PEX1O43933 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PEX1O43933 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
PEX1O43933 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PEX1O43933 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.29■□□□□ 0.52
PEX1O43933 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.29■□□□□ 0.52
PEX1O43933 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.29■□□□□ 0.52
PEX1O43933 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PEX1O43933 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PEX1O43933 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PEX1O43933 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PEX1O43933 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PEX1O43933 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
PEX1O43933 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PEX1O43933 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PEX1O43933 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
PEX1O43933 HLA-G-202ENST00000376815 851 ntBASIC18.29■□□□□ 0.52
PEX1O43933 HLA-G-203ENST00000376818 1127 ntBASIC18.29■□□□□ 0.52
PEX1O43933 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.29■□□□□ 0.52
PEX1O43933 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.29■□□□□ 0.52
PEX1O43933 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.29■□□□□ 0.52
PEX1O43933 PRKY-204ENST00000533551 1019 ntBASIC18.29■□□□□ 0.52
PEX1O43933 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.29■□□□□ 0.52
PEX1O43933 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.29■□□□□ 0.52
PEX1O43933 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PEX1O43933 AL512353.2-201ENST00000448759 1962 ntBASIC18.29■□□□□ 0.52
PEX1O43933 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PEX1O43933 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PEX1O43933 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PEX1O43933 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
PEX1O43933 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
PEX1O43933 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.29■□□□□ 0.52
PEX1O43933 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PEX1O43933 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PEX1O43933 TEX21P-204ENST00000641479 1693 ntBASIC18.28■□□□□ 0.52
PEX1O43933 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PEX1O43933 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PEX1O43933 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.28■□□□□ 0.52
PEX1O43933 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PEX1O43933 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PEX1O43933 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PEX1O43933 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PEX1O43933 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PEX1O43933 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PEX1O43933 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PEX1O43933 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.28■□□□□ 0.52
PEX1O43933 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PEX1O43933 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PEX1O43933 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.28■□□□□ 0.52
PEX1O43933 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.28■□□□□ 0.52
PEX1O43933 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PEX1O43933 AC110285.5-201ENST00000611501 352 ntBASIC18.28■□□□□ 0.52
PEX1O43933 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PEX1O43933 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PEX1O43933 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PEX1O43933 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PEX1O43933 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PEX1O43933 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PEX1O43933 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.28■□□□□ 0.52
PEX1O43933 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PEX1O43933 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PEX1O43933 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.28■□□□□ 0.52
PEX1O43933 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
PEX1O43933 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.28■□□□□ 0.52
PEX1O43933 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms