Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 AC009947.2-201ENST00000444014 672 ntBASIC16.82■□□□□ 0.28
CXCL13O43927 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CXCL13O43927 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CXCL13O43927 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.82■□□□□ 0.28
CXCL13O43927 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.82■□□□□ 0.28
CXCL13O43927 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CXCL13O43927 MIR3180-5-201ENST00000583743 153 ntBASIC16.82■□□□□ 0.28
CXCL13O43927 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CXCL13O43927 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.82■□□□□ 0.28
CXCL13O43927 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CXCL13O43927 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CXCL13O43927 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CXCL13O43927 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CXCL13O43927 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.82■□□□□ 0.28
CXCL13O43927 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
CXCL13O43927 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CXCL13O43927 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CXCL13O43927 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CXCL13O43927 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CXCL13O43927 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.82■□□□□ 0.28
CXCL13O43927 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CXCL13O43927 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
CXCL13O43927 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CXCL13O43927 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CXCL13O43927 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CXCL13O43927 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CXCL13O43927 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CXCL13O43927 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.81■□□□□ 0.28
CXCL13O43927 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CXCL13O43927 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CXCL13O43927 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CXCL13O43927 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CXCL13O43927 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CXCL13O43927 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CXCL13O43927 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.81■□□□□ 0.28
CXCL13O43927 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.81■□□□□ 0.28
CXCL13O43927 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CXCL13O43927 AC008556.1-201ENST00000610908 2040 ntBASIC16.81■□□□□ 0.28
CXCL13O43927 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CXCL13O43927 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CXCL13O43927 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.81■□□□□ 0.28
CXCL13O43927 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CXCL13O43927 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.81■□□□□ 0.28
CXCL13O43927 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CXCL13O43927 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CXCL13O43927 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.81■□□□□ 0.28
CXCL13O43927 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.81■□□□□ 0.28
CXCL13O43927 BX664615.1-201ENST00000443558 458 ntBASIC16.81■□□□□ 0.28
CXCL13O43927 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.81■□□□□ 0.28
CXCL13O43927 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CXCL13O43927 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.81■□□□□ 0.28
CXCL13O43927 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.81■□□□□ 0.28
CXCL13O43927 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.81■□□□□ 0.28
CXCL13O43927 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CXCL13O43927 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CXCL13O43927 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CXCL13O43927 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.81■□□□□ 0.28
CXCL13O43927 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CXCL13O43927 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CXCL13O43927 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CXCL13O43927 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CXCL13O43927 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CXCL13O43927 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CXCL13O43927 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CXCL13O43927 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CXCL13O43927 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CXCL13O43927 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CXCL13O43927 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CXCL13O43927 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CXCL13O43927 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.8■□□□□ 0.28
CXCL13O43927 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CXCL13O43927 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CXCL13O43927 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.8■□□□□ 0.28
CXCL13O43927 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CXCL13O43927 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CXCL13O43927 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CXCL13O43927 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CXCL13O43927 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CXCL13O43927 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.8■□□□□ 0.28
CXCL13O43927 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.8■□□□□ 0.28
CXCL13O43927 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CXCL13O43927 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CXCL13O43927 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.8■□□□□ 0.28
CXCL13O43927 WWOX-216ENST00000569818 525 ntBASIC16.8■□□□□ 0.28
CXCL13O43927 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.8■□□□□ 0.28
CXCL13O43927 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.8■□□□□ 0.28
CXCL13O43927 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.8■□□□□ 0.28
CXCL13O43927 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.8■□□□□ 0.28
CXCL13O43927 AL109659.2-201ENST00000606809 1674 ntBASIC16.8■□□□□ 0.28
CXCL13O43927 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CXCL13O43927 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.8■□□□□ 0.28
CXCL13O43927 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CXCL13O43927 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CXCL13O43927 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CXCL13O43927 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CXCL13O43927 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CXCL13O43927 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CXCL13O43927 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CXCL13O43927 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CXCL13O43927 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms