Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.25■□□□□ 0.35
IDH3BO43837 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
IDH3BO43837 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.25■□□□□ 0.35
IDH3BO43837 AC008687.6-201ENST00000596318 630 ntBASIC17.25■□□□□ 0.35
IDH3BO43837 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.25■□□□□ 0.35
IDH3BO43837 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.25■□□□□ 0.35
IDH3BO43837 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
IDH3BO43837 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IDH3BO43837 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.25■□□□□ 0.35
IDH3BO43837 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IDH3BO43837 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IDH3BO43837 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.25■□□□□ 0.35
IDH3BO43837 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.25■□□□□ 0.35
IDH3BO43837 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IDH3BO43837 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IDH3BO43837 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.25■□□□□ 0.35
IDH3BO43837 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
IDH3BO43837 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
IDH3BO43837 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IDH3BO43837 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IDH3BO43837 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IDH3BO43837 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IDH3BO43837 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IDH3BO43837 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IDH3BO43837 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IDH3BO43837 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IDH3BO43837 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.24■□□□□ 0.35
IDH3BO43837 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.24■□□□□ 0.35
IDH3BO43837 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IDH3BO43837 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
IDH3BO43837 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IDH3BO43837 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IDH3BO43837 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.24■□□□□ 0.35
IDH3BO43837 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.24■□□□□ 0.35
IDH3BO43837 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IDH3BO43837 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
IDH3BO43837 AC083880.1-201ENST00000608266 535 ntBASIC17.24■□□□□ 0.35
IDH3BO43837 AC133041.1-202ENST00000642053 222 ntBASIC17.24■□□□□ 0.35
IDH3BO43837 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IDH3BO43837 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.24■□□□□ 0.35
IDH3BO43837 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IDH3BO43837 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
IDH3BO43837 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IDH3BO43837 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
IDH3BO43837 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.24■□□□□ 0.35
IDH3BO43837 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
IDH3BO43837 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IDH3BO43837 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
IDH3BO43837 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.24■□□□□ 0.35
IDH3BO43837 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.24■□□□□ 0.35
IDH3BO43837 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
IDH3BO43837 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.24■□□□□ 0.35
IDH3BO43837 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
IDH3BO43837 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
IDH3BO43837 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
IDH3BO43837 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.24■□□□□ 0.35
IDH3BO43837 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IDH3BO43837 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.24■□□□□ 0.35
IDH3BO43837 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
IDH3BO43837 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IDH3BO43837 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
IDH3BO43837 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IDH3BO43837 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
IDH3BO43837 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.23■□□□□ 0.35
IDH3BO43837 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IDH3BO43837 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IDH3BO43837 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
IDH3BO43837 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.23■□□□□ 0.35
IDH3BO43837 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
IDH3BO43837 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IDH3BO43837 MIR935-201ENST00000401179 91 ntBASIC17.23■□□□□ 0.35
IDH3BO43837 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IDH3BO43837 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IDH3BO43837 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IDH3BO43837 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.23■□□□□ 0.35
IDH3BO43837 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.23■□□□□ 0.35
IDH3BO43837 SOX15-203ENST00000570788 1093 ntBASIC17.23■□□□□ 0.35
IDH3BO43837 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IDH3BO43837 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
IDH3BO43837 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IDH3BO43837 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IDH3BO43837 AC068880.1-201ENST00000507289 2297 ntBASIC17.23■□□□□ 0.35
IDH3BO43837 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
IDH3BO43837 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IDH3BO43837 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
IDH3BO43837 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.23■□□□□ 0.35
IDH3BO43837 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.23■□□□□ 0.35
IDH3BO43837 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IDH3BO43837 Z98044.1-201ENST00000632503 1764 ntBASIC17.23■□□□□ 0.35
IDH3BO43837 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.22■□□□□ 0.35
IDH3BO43837 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IDH3BO43837 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IDH3BO43837 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
IDH3BO43837 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.22■□□□□ 0.35
IDH3BO43837 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.22■□□□□ 0.35
IDH3BO43837 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
IDH3BO43837 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
IDH3BO43837 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IDH3BO43837 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
IDH3BO43837 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms