Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF13O43567 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF13O43567 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF13O43567 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF13O43567 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF13O43567 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF13O43567 NIFKP9-201ENST00000419265 221 ntBASIC17.12■□□□□ 0.33
RNF13O43567 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF13O43567 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.12■□□□□ 0.33
RNF13O43567 AL445675.2-201ENST00000620291 557 ntBASIC17.12■□□□□ 0.33
RNF13O43567 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.12■□□□□ 0.33
RNF13O43567 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF13O43567 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF13O43567 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF13O43567 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RNF13O43567 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF13O43567 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF13O43567 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF13O43567 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF13O43567 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF13O43567 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF13O43567 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RNF13O43567 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF13O43567 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF13O43567 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF13O43567 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF13O43567 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF13O43567 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF13O43567 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF13O43567 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF13O43567 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF13O43567 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
RNF13O43567 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF13O43567 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF13O43567 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF13O43567 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF13O43567 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF13O43567 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF13O43567 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF13O43567 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.11■□□□□ 0.33
RNF13O43567 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.11■□□□□ 0.33
RNF13O43567 ITM2C-210ENST00000620962 501 ntBASIC17.11■□□□□ 0.33
RNF13O43567 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.11■□□□□ 0.33
RNF13O43567 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF13O43567 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF13O43567 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF13O43567 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF13O43567 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF13O43567 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF13O43567 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF13O43567 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF13O43567 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF13O43567 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF13O43567 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF13O43567 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF13O43567 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF13O43567 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RNF13O43567 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RNF13O43567 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF13O43567 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF13O43567 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF13O43567 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RNF13O43567 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF13O43567 BICD1-207ENST00000551848 1962 ntBASIC17.1■□□□□ 0.33
RNF13O43567 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF13O43567 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF13O43567 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF13O43567 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF13O43567 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF13O43567 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF13O43567 AL353807.1-201ENST00000427475 662 ntBASIC17.1■□□□□ 0.33
RNF13O43567 TSPY23P-201ENST00000440136 739 ntBASIC17.1■□□□□ 0.33
RNF13O43567 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF13O43567 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF13O43567 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF13O43567 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.1■□□□□ 0.33
RNF13O43567 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF13O43567 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF13O43567 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF13O43567 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF13O43567 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
RNF13O43567 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF13O43567 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF13O43567 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF13O43567 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RNF13O43567 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF13O43567 KRT8P41-201ENST00000533985 1514 ntBASIC17.1■□□□□ 0.33
RNF13O43567 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF13O43567 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF13O43567 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF13O43567 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF13O43567 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF13O43567 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF13O43567 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RNF13O43567 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF13O43567 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF13O43567 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RNF13O43567 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF13O43567 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
RNF13O43567 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms