Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
NDUFS4O43181 AC093525.10-201ENST00000625130 1569 ntBASIC18■□□□□ 0.47
NDUFS4O43181 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFS4O43181 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFS4O43181 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.99■□□□□ 0.47
NDUFS4O43181 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFS4O43181 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFS4O43181 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFS4O43181 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.99■□□□□ 0.47
NDUFS4O43181 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFS4O43181 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFS4O43181 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
NDUFS4O43181 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFS4O43181 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFS4O43181 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
NDUFS4O43181 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFS4O43181 AC128688.1-201ENST00000487626 519 ntBASIC17.99■□□□□ 0.47
NDUFS4O43181 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.99■□□□□ 0.47
NDUFS4O43181 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.99■□□□□ 0.47
NDUFS4O43181 AC008622.2-201ENST00000617006 1229 ntBASIC17.99■□□□□ 0.47
NDUFS4O43181 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.99■□□□□ 0.47
NDUFS4O43181 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.99■□□□□ 0.47
NDUFS4O43181 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFS4O43181 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.99■□□□□ 0.47
NDUFS4O43181 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.99■□□□□ 0.47
NDUFS4O43181 LINC01568-207ENST00000641790 1380 ntBASIC17.99■□□□□ 0.47
NDUFS4O43181 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
NDUFS4O43181 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFS4O43181 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFS4O43181 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
NDUFS4O43181 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.99■□□□□ 0.47
NDUFS4O43181 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFS4O43181 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS4O43181 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS4O43181 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.98■□□□□ 0.47
NDUFS4O43181 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS4O43181 AC092338.2-201ENST00000568827 1415 ntBASIC17.98■□□□□ 0.47
NDUFS4O43181 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NDUFS4O43181 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS4O43181 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS4O43181 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.98■□□□□ 0.47
NDUFS4O43181 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS4O43181 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS4O43181 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.98■□□□□ 0.47
NDUFS4O43181 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
NDUFS4O43181 AP003041.3-201ENST00000527151 707 ntBASIC17.98■□□□□ 0.47
NDUFS4O43181 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.98■□□□□ 0.47
NDUFS4O43181 AL353719.1-201ENST00000566847 864 ntBASIC17.98■□□□□ 0.47
NDUFS4O43181 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.98■□□□□ 0.47
NDUFS4O43181 AC133561.5-201ENST00000635547 218 ntBASIC17.98■□□□□ 0.47
NDUFS4O43181 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.98■□□□□ 0.47
NDUFS4O43181 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS4O43181 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
NDUFS4O43181 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS4O43181 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS4O43181 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS4O43181 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS4O43181 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS4O43181 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.98■□□□□ 0.47
NDUFS4O43181 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.98■□□□□ 0.47
NDUFS4O43181 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS4O43181 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS4O43181 RCC2P3-201ENST00000418112 1537 ntBASIC17.98■□□□□ 0.47
NDUFS4O43181 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
NDUFS4O43181 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS4O43181 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS4O43181 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NDUFS4O43181 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NDUFS4O43181 AL031598.1-201ENST00000561511 1773 ntBASIC17.97■□□□□ 0.47
NDUFS4O43181 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NDUFS4O43181 HEIH-201ENST00000623091 1652 ntBASIC17.97■□□□□ 0.47
NDUFS4O43181 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NDUFS4O43181 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.97■□□□□ 0.47
NDUFS4O43181 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NDUFS4O43181 AC007663.1-201ENST00000438948 1240 ntBASIC17.97■□□□□ 0.47
NDUFS4O43181 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
NDUFS4O43181 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.97■□□□□ 0.47
NDUFS4O43181 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NDUFS4O43181 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NDUFS4O43181 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NDUFS4O43181 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
NDUFS4O43181 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NDUFS4O43181 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
NDUFS4O43181 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NDUFS4O43181 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NDUFS4O43181 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NDUFS4O43181 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NDUFS4O43181 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.97■□□□□ 0.47
NDUFS4O43181 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NDUFS4O43181 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NDUFS4O43181 HCG11-201ENST00000411553 5696 ntBASIC17.97■□□□□ 0.47
NDUFS4O43181 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NDUFS4O43181 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.97■□□□□ 0.47
NDUFS4O43181 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.97■□□□□ 0.47
NDUFS4O43181 GPAT2P1-201ENST00000444924 1672 ntBASIC17.96■□□□□ 0.47
NDUFS4O43181 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NDUFS4O43181 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NDUFS4O43181 KRT8P32-201ENST00000512863 1461 ntBASIC17.96■□□□□ 0.47
NDUFS4O43181 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NDUFS4O43181 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms