Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.3■□□□□ 0.36
TO15178 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.3■□□□□ 0.36
TO15178 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.3■□□□□ 0.36
TO15178 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.3■□□□□ 0.36
TO15178 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TO15178 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TO15178 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TO15178 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TO15178 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TO15178 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TO15178 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TO15178 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.3■□□□□ 0.36
TO15178 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TO15178 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.3■□□□□ 0.36
TO15178 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.3■□□□□ 0.36
TO15178 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TO15178 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.29■□□□□ 0.36
TO15178 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TO15178 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
TO15178 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TO15178 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TO15178 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TO15178 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TO15178 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.29■□□□□ 0.36
TO15178 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TO15178 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TO15178 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TO15178 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TO15178 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TO15178 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TO15178 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TO15178 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TO15178 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TO15178 MIR564-202ENST00000385049 94 ntBASIC17.29■□□□□ 0.36
TO15178 SLC25A3P1-201ENST00000443844 931 ntBASIC17.29■□□□□ 0.36
TO15178 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
TO15178 CR769767.2-201ENST00000622735 460 ntBASIC17.29■□□□□ 0.36
TO15178 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.29■□□□□ 0.36
TO15178 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.29■□□□□ 0.36
TO15178 AC008556.1-201ENST00000610908 2040 ntBASIC17.29■□□□□ 0.36
TO15178 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.29■□□□□ 0.36
TO15178 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TO15178 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TO15178 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TO15178 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.29■□□□□ 0.36
TO15178 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TO15178 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.29■□□□□ 0.36
TO15178 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
TO15178 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.28■□□□□ 0.36
TO15178 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TO15178 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TO15178 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TO15178 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TO15178 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TO15178 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TO15178 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.28■□□□□ 0.36
TO15178 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.28■□□□□ 0.36
TO15178 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TO15178 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
TO15178 CROCCP3-202ENST00000420820 1947 ntBASIC17.28■□□□□ 0.36
TO15178 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TO15178 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TO15178 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.28■□□□□ 0.36
TO15178 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
TO15178 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TO15178 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TO15178 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TO15178 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TO15178 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TO15178 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.28■□□□□ 0.36
TO15178 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TO15178 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.28■□□□□ 0.36
TO15178 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TO15178 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TO15178 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TO15178 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
TO15178 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TO15178 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TO15178 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TO15178 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TO15178 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.28■□□□□ 0.36
TO15178 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TO15178 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TO15178 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TO15178 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TO15178 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TO15178 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TO15178 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TO15178 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TO15178 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.27■□□□□ 0.36
TO15178 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TO15178 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TO15178 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TO15178 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TO15178 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TO15178 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.27■□□□□ 0.36
TO15178 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TO15178 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.27■□□□□ 0.36
TO15178 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
TO15178 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms