Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 MED16-201ENST00000269814 1199 ntTSL 5 BASIC30.41■■■□□ 2.46
CHD1O14646 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC30.41■■■□□ 2.46
CHD1O14646 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC30.41■■■□□ 2.46
CHD1O14646 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC30.41■■■□□ 2.46
CHD1O14646 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC30.41■■■□□ 2.46
CHD1O14646 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC30.41■■■□□ 2.46
CHD1O14646 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC30.41■■■□□ 2.46
CHD1O14646 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
CHD1O14646 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC30.41■■■□□ 2.46
CHD1O14646 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CHD1O14646 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC30.4■■■□□ 2.46
CHD1O14646 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CHD1O14646 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CHD1O14646 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CHD1O14646 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
CHD1O14646 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC30.4■■■□□ 2.46
CHD1O14646 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CHD1O14646 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC30.4■■■□□ 2.46
CHD1O14646 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC30.4■■■□□ 2.46
CHD1O14646 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC30.4■■■□□ 2.46
CHD1O14646 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC30.4■■■□□ 2.46
CHD1O14646 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC30.4■■■□□ 2.46
CHD1O14646 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
CHD1O14646 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CHD1O14646 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CHD1O14646 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
CHD1O14646 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CHD1O14646 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
CHD1O14646 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC30.39■■■□□ 2.46
CHD1O14646 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC30.39■■■□□ 2.46
CHD1O14646 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CHD1O14646 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC30.39■■■□□ 2.46
CHD1O14646 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC30.39■■■□□ 2.46
CHD1O14646 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC30.39■■■□□ 2.46
CHD1O14646 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC30.39■■■□□ 2.46
CHD1O14646 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CHD1O14646 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
CHD1O14646 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CHD1O14646 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.46
CHD1O14646 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.45
CHD1O14646 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.45
CHD1O14646 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
CHD1O14646 LHX6-205ENST00000464484 666 ntTSL 2 BASIC30.39■■■□□ 2.45
CHD1O14646 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC30.39■■■□□ 2.45
CHD1O14646 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC30.39■■■□□ 2.45
CHD1O14646 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC30.39■■■□□ 2.45
CHD1O14646 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC30.38■■■□□ 2.45
CHD1O14646 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
CHD1O14646 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC30.38■■■□□ 2.45
CHD1O14646 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CHD1O14646 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
CHD1O14646 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
CHD1O14646 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
CHD1O14646 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
CHD1O14646 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC30.38■■■□□ 2.45
CHD1O14646 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC30.38■■■□□ 2.45
CHD1O14646 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC30.38■■■□□ 2.45
CHD1O14646 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC30.38■■■□□ 2.45
CHD1O14646 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC30.38■■■□□ 2.45
CHD1O14646 HLA-J-201ENST00000462773 1622 ntBASIC30.38■■■□□ 2.45
CHD1O14646 BID-212ENST00000614949 1988 ntTSL 5 BASIC30.38■■■□□ 2.45
CHD1O14646 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
CHD1O14646 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC30.38■■■□□ 2.45
CHD1O14646 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
CHD1O14646 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
CHD1O14646 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC30.37■■■□□ 2.45
CHD1O14646 AC023274.1-201ENST00000418278 595 ntBASIC30.37■■■□□ 2.45
CHD1O14646 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
CHD1O14646 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC30.37■■■□□ 2.45
CHD1O14646 AC025062.2-201ENST00000605477 670 ntBASIC30.37■■■□□ 2.45
CHD1O14646 KRT18P28-201ENST00000453838 1332 ntBASIC30.37■■■□□ 2.45
CHD1O14646 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CHD1O14646 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CHD1O14646 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CHD1O14646 HLA-J-202ENST00000469281 1241 ntBASIC30.36■■■□□ 2.45
CHD1O14646 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC30.36■■■□□ 2.45
CHD1O14646 CYGB-205ENST00000590175 830 ntTSL 3 BASIC30.36■■■□□ 2.45
CHD1O14646 AL596442.2-201ENST00000610240 980 ntBASIC30.36■■■□□ 2.45
CHD1O14646 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC30.36■■■□□ 2.45
CHD1O14646 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CHD1O14646 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CHD1O14646 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CHD1O14646 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CHD1O14646 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CHD1O14646 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC30.36■■■□□ 2.45
CHD1O14646 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CHD1O14646 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CHD1O14646 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
CHD1O14646 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CHD1O14646 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CHD1O14646 RPS2P28-201ENST00000314255 741 ntBASIC30.36■■■□□ 2.45
CHD1O14646 RAB17-203ENST00000409576 466 ntTSL 3 BASIC30.36■■■□□ 2.45
CHD1O14646 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CHD1O14646 MIR3180-4-201ENST00000582223 153 ntBASIC30.36■■■□□ 2.45
CHD1O14646 COPE-211ENST00000600932 1144 ntTSL 5 BASIC30.36■■■□□ 2.45
CHD1O14646 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC30.36■■■□□ 2.45
CHD1O14646 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CHD1O14646 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CHD1O14646 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
CHD1O14646 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms