Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC188H7C350 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC188H7C350 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC188H7C350 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC188H7C350 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC188H7C350 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC188H7C350 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC188H7C350 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CCDC188H7C350 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CCDC188H7C350 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC188H7C350 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC188H7C350 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC188H7C350 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC188H7C350 AC135776.1-201ENST00000319817 2481 ntBASIC19.55■□□□□ 0.72
CCDC188H7C350 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC188H7C350 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC188H7C350 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC188H7C350 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC188H7C350 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC188H7C350 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC188H7C350 AC008687.6-201ENST00000596318 630 ntBASIC19.55■□□□□ 0.72
CCDC188H7C350 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC188H7C350 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC188H7C350 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC188H7C350 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC188H7C350 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC188H7C350 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CCDC188H7C350 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CCDC188H7C350 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC188H7C350 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC188H7C350 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC188H7C350 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCDC188H7C350 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC188H7C350 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC188H7C350 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC188H7C350 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC188H7C350 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC188H7C350 AC112777.1-201ENST00000540175 1423 ntBASIC19.54■□□□□ 0.72
CCDC188H7C350 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC188H7C350 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC188H7C350 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC188H7C350 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC188H7C350 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CCDC188H7C350 AC083906.2-201ENST00000511578 360 ntBASIC19.54■□□□□ 0.72
CCDC188H7C350 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC188H7C350 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC188H7C350 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC188H7C350 C1QL1P1-201ENST00000568105 661 ntBASIC19.54■□□□□ 0.72
CCDC188H7C350 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CCDC188H7C350 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.54■□□□□ 0.72
CCDC188H7C350 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC188H7C350 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC188H7C350 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.54■□□□□ 0.72
CCDC188H7C350 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC188H7C350 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC188H7C350 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CCDC188H7C350 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC188H7C350 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC188H7C350 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC188H7C350 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC188H7C350 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CCDC188H7C350 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CCDC188H7C350 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CCDC188H7C350 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC188H7C350 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC188H7C350 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC188H7C350 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC188H7C350 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC188H7C350 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CCDC188H7C350 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC188H7C350 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC188H7C350 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.53■□□□□ 0.72
CCDC188H7C350 KRT8P41-201ENST00000533985 1514 ntBASIC19.53■□□□□ 0.72
CCDC188H7C350 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC188H7C350 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC188H7C350 CROCCP5-201ENST00000436658 830 ntBASIC19.53■□□□□ 0.72
CCDC188H7C350 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CCDC188H7C350 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CCDC188H7C350 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC188H7C350 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC188H7C350 MIR4758-201ENST00000577688 71 ntBASIC19.53■□□□□ 0.72
CCDC188H7C350 MIR5787-201ENST00000611784 55 ntBASIC19.53■□□□□ 0.72
CCDC188H7C350 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC188H7C350 GNAS-203ENST00000306120 1878 ntBASIC19.53■□□□□ 0.72
CCDC188H7C350 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CCDC188H7C350 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC188H7C350 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC188H7C350 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC188H7C350 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CCDC188H7C350 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC188H7C350 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC188H7C350 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC188H7C350 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC188H7C350 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC188H7C350 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC188H7C350 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC188H7C350 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC188H7C350 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
CCDC188H7C350 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC188H7C350 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms