Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CFAP99D6REC4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CFAP99D6REC4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CFAP99D6REC4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.74■□□□□ 0.59
CFAP99D6REC4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CFAP99D6REC4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.74■□□□□ 0.59
CFAP99D6REC4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.74■□□□□ 0.59
CFAP99D6REC4 MMP23A-201ENST00000234610 1017 ntBASIC18.74■□□□□ 0.59
CFAP99D6REC4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.74■□□□□ 0.59
CFAP99D6REC4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.74■□□□□ 0.59
CFAP99D6REC4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.74■□□□□ 0.59
CFAP99D6REC4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.74■□□□□ 0.59
CFAP99D6REC4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
CFAP99D6REC4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.74■□□□□ 0.59
CFAP99D6REC4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CFAP99D6REC4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CFAP99D6REC4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CFAP99D6REC4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CFAP99D6REC4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CFAP99D6REC4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.74■□□□□ 0.59
CFAP99D6REC4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
CFAP99D6REC4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.74■□□□□ 0.59
CFAP99D6REC4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CFAP99D6REC4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CFAP99D6REC4 KRT8P3-201ENST00000519669 1449 ntBASIC18.74■□□□□ 0.59
CFAP99D6REC4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CFAP99D6REC4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.74■□□□□ 0.59
CFAP99D6REC4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CFAP99D6REC4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.74■□□□□ 0.59
CFAP99D6REC4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
CFAP99D6REC4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CFAP99D6REC4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.73■□□□□ 0.59
CFAP99D6REC4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CFAP99D6REC4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CFAP99D6REC4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.73■□□□□ 0.59
CFAP99D6REC4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CFAP99D6REC4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CFAP99D6REC4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CFAP99D6REC4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
CFAP99D6REC4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CFAP99D6REC4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CFAP99D6REC4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CFAP99D6REC4 AL390955.1-201ENST00000428694 934 ntBASIC18.73■□□□□ 0.59
CFAP99D6REC4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CFAP99D6REC4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CFAP99D6REC4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.73■□□□□ 0.59
CFAP99D6REC4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.73■□□□□ 0.59
CFAP99D6REC4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.73■□□□□ 0.59
CFAP99D6REC4 AC005082.1-201ENST00000413042 2259 ntBASIC18.73■□□□□ 0.59
CFAP99D6REC4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CFAP99D6REC4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CFAP99D6REC4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CFAP99D6REC4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CFAP99D6REC4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.73■□□□□ 0.59
CFAP99D6REC4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CFAP99D6REC4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CFAP99D6REC4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CFAP99D6REC4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CFAP99D6REC4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CFAP99D6REC4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CFAP99D6REC4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CFAP99D6REC4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CFAP99D6REC4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CFAP99D6REC4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CFAP99D6REC4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CFAP99D6REC4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CFAP99D6REC4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CFAP99D6REC4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CFAP99D6REC4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CFAP99D6REC4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.72■□□□□ 0.59
CFAP99D6REC4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CFAP99D6REC4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.72■□□□□ 0.59
CFAP99D6REC4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.72■□□□□ 0.59
CFAP99D6REC4 SLC25A1P2-201ENST00000430693 912 ntBASIC18.72■□□□□ 0.59
CFAP99D6REC4 CCR12P-201ENST00000446203 998 ntBASIC18.72■□□□□ 0.59
CFAP99D6REC4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CFAP99D6REC4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.72■□□□□ 0.59
CFAP99D6REC4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CFAP99D6REC4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.72■□□□□ 0.59
CFAP99D6REC4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CFAP99D6REC4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CFAP99D6REC4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CFAP99D6REC4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CFAP99D6REC4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CFAP99D6REC4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CFAP99D6REC4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CFAP99D6REC4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CFAP99D6REC4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CFAP99D6REC4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CFAP99D6REC4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.71■□□□□ 0.59
CFAP99D6REC4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
CFAP99D6REC4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CFAP99D6REC4 TSPY15P-201ENST00000457163 923 ntBASIC18.71■□□□□ 0.59
CFAP99D6REC4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CFAP99D6REC4 BX088651.1-201ENST00000540551 451 ntBASIC18.71■□□□□ 0.59
CFAP99D6REC4 NAPSB-206ENST00000562112 1266 ntBASIC18.71■□□□□ 0.59
CFAP99D6REC4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.71■□□□□ 0.59
CFAP99D6REC4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CFAP99D6REC4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CFAP99D6REC4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms