Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM49D1C9J1S8 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TRIM49D1C9J1S8 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 RCC2P6-201ENST00000526625 1557 ntBASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 KRT8P41-201ENST00000533985 1514 ntBASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 NBPF21P-201ENST00000425093 1451 ntBASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 PRKY-204ENST00000533551 1019 ntBASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 AL162741.1-201ENST00000565563 1558 ntBASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.85■□□□□ 0.61
TRIM49D1C9J1S8 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM49D1C9J1S8 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
TRIM49D1C9J1S8 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM49D1C9J1S8 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM49D1C9J1S8 AC067852.2-201ENST00000590513 2313 ntBASIC18.84■□□□□ 0.61
TRIM49D1C9J1S8 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
TRIM49D1C9J1S8 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM49D1C9J1S8 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM49D1C9J1S8 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM49D1C9J1S8 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TRIM49D1C9J1S8 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM49D1C9J1S8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TRIM49D1C9J1S8 POM121L13P-201ENST00000422362 380 ntBASIC18.84■□□□□ 0.61
TRIM49D1C9J1S8 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM49D1C9J1S8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM49D1C9J1S8 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM49D1C9J1S8 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM49D1C9J1S8 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM49D1C9J1S8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
TRIM49D1C9J1S8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM49D1C9J1S8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM49D1C9J1S8 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM49D1C9J1S8 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM49D1C9J1S8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.83■□□□□ 0.61
TRIM49D1C9J1S8 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
TRIM49D1C9J1S8 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.83■□□□□ 0.61
TRIM49D1C9J1S8 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.83■□□□□ 0.61
TRIM49D1C9J1S8 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM49D1C9J1S8 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
TRIM49D1C9J1S8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM49D1C9J1S8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.61
TRIM49D1C9J1S8 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM49D1C9J1S8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.83■□□□□ 0.61
TRIM49D1C9J1S8 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM49D1C9J1S8 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.83■□□□□ 0.6
TRIM49D1C9J1S8 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM49D1C9J1S8 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM49D1C9J1S8 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TRIM49D1C9J1S8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.83■□□□□ 0.6
TRIM49D1C9J1S8 MTMR9LP-203ENST00000426597 1545 ntBASIC18.83■□□□□ 0.6
TRIM49D1C9J1S8 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM49D1C9J1S8 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TRIM49D1C9J1S8 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM49D1C9J1S8 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM49D1C9J1S8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM49D1C9J1S8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM49D1C9J1S8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms