Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 NKILA-202ENST00000614771 2598 ntBASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 DUX4L2-201ENST00000561772 1275 ntBASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 DUX4L6-201ENST00000626483 1275 ntBASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 DUX4L1-201ENST00000627662 1275 ntBASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 DUX4L8-201ENST00000629013 1275 ntBASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 DUX4L3-201ENST00000630187 1275 ntBASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 DUX4L7-201ENST00000630678 1275 ntBASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 DUX4L5-201ENST00000630834 1275 ntBASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RBFOX3A6NFN3 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 CYP21A1P-202ENST00000354927 1481 ntBASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 AL118508.1-201ENST00000613502 2345 ntBASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 AC011676.5-201ENST00000624864 2660 ntBASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RBFOX3A6NFN3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
RBFOX3A6NFN3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
RBFOX3A6NFN3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.83□□□□□ -0.03
RBFOX3A6NFN3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
RBFOX3A6NFN3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
RBFOX3A6NFN3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RBFOX3A6NFN3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
RBFOX3A6NFN3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
RBFOX3A6NFN3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RBFOX3A6NFN3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RBFOX3A6NFN3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RBFOX3A6NFN3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RBFOX3A6NFN3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RBFOX3A6NFN3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
RBFOX3A6NFN3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RBFOX3A6NFN3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC14.83□□□□□ -0.04
RBFOX3A6NFN3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC14.83□□□□□ -0.04
RBFOX3A6NFN3 CCDC92B-201ENST00000575506 885 ntBASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms