Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC189A1A4V9 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC189A1A4V9 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCDC189A1A4V9 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC189A1A4V9 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC189A1A4V9 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC189A1A4V9 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC189A1A4V9 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC189A1A4V9 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC189A1A4V9 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC189A1A4V9 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC189A1A4V9 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC189A1A4V9 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCDC189A1A4V9 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC189A1A4V9 KRT17P3-201ENST00000420566 1262 ntBASIC18.8■□□□□ 0.6
CCDC189A1A4V9 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC189A1A4V9 AL160286.2-201ENST00000567150 934 ntBASIC18.8■□□□□ 0.6
CCDC189A1A4V9 AC008403.3-201ENST00000598924 454 ntBASIC18.8■□□□□ 0.6
CCDC189A1A4V9 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.8■□□□□ 0.6
CCDC189A1A4V9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCDC189A1A4V9 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC189A1A4V9 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC189A1A4V9 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC189A1A4V9 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CCDC189A1A4V9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC189A1A4V9 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC189A1A4V9 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC189A1A4V9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC189A1A4V9 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC189A1A4V9 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC189A1A4V9 AC018695.7-201ENST00000624587 2492 ntBASIC18.79■□□□□ 0.6
CCDC189A1A4V9 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC189A1A4V9 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC189A1A4V9 Z98044.1-201ENST00000632503 1764 ntBASIC18.79■□□□□ 0.6
CCDC189A1A4V9 PCDHA12-202ENST00000613593 2588 ntBASIC18.79■□□□□ 0.6
CCDC189A1A4V9 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCDC189A1A4V9 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC189A1A4V9 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC189A1A4V9 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CCDC189A1A4V9 AP003097.1-201ENST00000530657 1135 ntBASIC18.79■□□□□ 0.6
CCDC189A1A4V9 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC189A1A4V9 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCDC189A1A4V9 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC189A1A4V9 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC189A1A4V9 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC189A1A4V9 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC189A1A4V9 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC189A1A4V9 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCDC189A1A4V9 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC189A1A4V9 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC189A1A4V9 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC189A1A4V9 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC189A1A4V9 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC189A1A4V9 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC189A1A4V9 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC189A1A4V9 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC189A1A4V9 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC189A1A4V9 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC189A1A4V9 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC189A1A4V9 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC189A1A4V9 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
CCDC189A1A4V9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC189A1A4V9 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC189A1A4V9 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC189A1A4V9 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC189A1A4V9 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC189A1A4V9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC189A1A4V9 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCDC189A1A4V9 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC189A1A4V9 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC189A1A4V9 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC189A1A4V9 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC189A1A4V9 MTDHP1-201ENST00000605323 784 ntBASIC18.78■□□□□ 0.6
CCDC189A1A4V9 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC189A1A4V9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
CCDC189A1A4V9 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CCDC189A1A4V9 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC189A1A4V9 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC189A1A4V9 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC189A1A4V9 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CCDC189A1A4V9 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CCDC189A1A4V9 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC189A1A4V9 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC189A1A4V9 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC189A1A4V9 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC189A1A4V9 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC189A1A4V9 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC189A1A4V9 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC189A1A4V9 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC189A1A4V9 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC189A1A4V9 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC189A1A4V9 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC189A1A4V9 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC189A1A4V9 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC189A1A4V9 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC189A1A4V9 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CCDC189A1A4V9 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CCDC189A1A4V9 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.77■□□□□ 0.6
CCDC189A1A4V9 AC026366.1-201ENST00000488803 879 ntBASIC18.77■□□□□ 0.6
CCDC189A1A4V9 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms