Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LOC102724428A0A0B4J2F2 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
LOC102724428A0A0B4J2F2 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.9■■□□□ 1.42
LOC102724428A0A0B4J2F2 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LOC102724428A0A0B4J2F2 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LOC102724428A0A0B4J2F2 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
LOC102724428A0A0B4J2F2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC23.9■■□□□ 1.42
LOC102724428A0A0B4J2F2 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
LOC102724428A0A0B4J2F2 NAT14-202ENST00000587400 416 ntTSL 5 BASIC23.9■■□□□ 1.42
LOC102724428A0A0B4J2F2 AC024563.2-201ENST00000603282 481 ntBASIC23.9■■□□□ 1.42
LOC102724428A0A0B4J2F2 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC23.89■■□□□ 1.42
LOC102724428A0A0B4J2F2 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
LOC102724428A0A0B4J2F2 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
LOC102724428A0A0B4J2F2 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
LOC102724428A0A0B4J2F2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
LOC102724428A0A0B4J2F2 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
LOC102724428A0A0B4J2F2 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.42
LOC102724428A0A0B4J2F2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
LOC102724428A0A0B4J2F2 NUS1P2-201ENST00000417358 873 ntBASIC23.89■■□□□ 1.41
LOC102724428A0A0B4J2F2 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
LOC102724428A0A0B4J2F2 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC23.89■■□□□ 1.41
LOC102724428A0A0B4J2F2 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
LOC102724428A0A0B4J2F2 AF228730.7-201ENST00000641842 219 ntBASIC23.89■■□□□ 1.41
LOC102724428A0A0B4J2F2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
LOC102724428A0A0B4J2F2 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.89■■□□□ 1.41
LOC102724428A0A0B4J2F2 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC23.89■■□□□ 1.41
LOC102724428A0A0B4J2F2 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC23.89■■□□□ 1.41
LOC102724428A0A0B4J2F2 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LOC102724428A0A0B4J2F2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LOC102724428A0A0B4J2F2 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LOC102724428A0A0B4J2F2 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
LOC102724428A0A0B4J2F2 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
LOC102724428A0A0B4J2F2 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LOC102724428A0A0B4J2F2 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC23.88■■□□□ 1.41
LOC102724428A0A0B4J2F2 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC23.88■■□□□ 1.41
LOC102724428A0A0B4J2F2 PPOX-214ENST00000535223 664 ntTSL 3 BASIC23.88■■□□□ 1.41
LOC102724428A0A0B4J2F2 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
LOC102724428A0A0B4J2F2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC23.88■■□□□ 1.41
LOC102724428A0A0B4J2F2 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.88■■□□□ 1.41
LOC102724428A0A0B4J2F2 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
LOC102724428A0A0B4J2F2 PWWP2AP1-201ENST00000429776 2273 ntBASIC23.87■■□□□ 1.41
LOC102724428A0A0B4J2F2 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC23.87■■□□□ 1.41
LOC102724428A0A0B4J2F2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
LOC102724428A0A0B4J2F2 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
LOC102724428A0A0B4J2F2 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
LOC102724428A0A0B4J2F2 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
LOC102724428A0A0B4J2F2 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC23.87■■□□□ 1.41
LOC102724428A0A0B4J2F2 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
LOC102724428A0A0B4J2F2 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC23.87■■□□□ 1.41
LOC102724428A0A0B4J2F2 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
LOC102724428A0A0B4J2F2 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
LOC102724428A0A0B4J2F2 ABR-217ENST00000572441 563 ntTSL 4 BASIC23.87■■□□□ 1.41
LOC102724428A0A0B4J2F2 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC23.87■■□□□ 1.41
LOC102724428A0A0B4J2F2 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC23.87■■□□□ 1.41
LOC102724428A0A0B4J2F2 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
LOC102724428A0A0B4J2F2 AC139530.3-201ENST00000620344 690 ntBASIC23.87■■□□□ 1.41
LOC102724428A0A0B4J2F2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LOC102724428A0A0B4J2F2 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LOC102724428A0A0B4J2F2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
LOC102724428A0A0B4J2F2 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
LOC102724428A0A0B4J2F2 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC23.87■■□□□ 1.41
LOC102724428A0A0B4J2F2 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
LOC102724428A0A0B4J2F2 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LOC102724428A0A0B4J2F2 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC23.86■■□□□ 1.41
LOC102724428A0A0B4J2F2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LOC102724428A0A0B4J2F2 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LOC102724428A0A0B4J2F2 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LOC102724428A0A0B4J2F2 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LOC102724428A0A0B4J2F2 MIR574-201ENST00000385209 96 ntBASIC23.86■■□□□ 1.41
LOC102724428A0A0B4J2F2 PMS2P1-201ENST00000431037 1228 ntBASIC23.86■■□□□ 1.41
LOC102724428A0A0B4J2F2 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
LOC102724428A0A0B4J2F2 VENTXP7-201ENST00000475503 772 ntBASIC23.86■■□□□ 1.41
LOC102724428A0A0B4J2F2 AC064862.7-201ENST00000604520 867 ntBASIC23.86■■□□□ 1.41
LOC102724428A0A0B4J2F2 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
LOC102724428A0A0B4J2F2 AL353692.3-201ENST00000407031 1396 ntBASIC23.86■■□□□ 1.41
LOC102724428A0A0B4J2F2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.86■■□□□ 1.41
LOC102724428A0A0B4J2F2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LOC102724428A0A0B4J2F2 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
LOC102724428A0A0B4J2F2 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
LOC102724428A0A0B4J2F2 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
LOC102724428A0A0B4J2F2 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
LOC102724428A0A0B4J2F2 IL9RP2-201ENST00000423948 1312 ntBASIC23.85■■□□□ 1.41
LOC102724428A0A0B4J2F2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC23.85■■□□□ 1.41
LOC102724428A0A0B4J2F2 CYP51A1P1-201ENST00000492267 1507 ntBASIC23.85■■□□□ 1.41
LOC102724428A0A0B4J2F2 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC23.85■■□□□ 1.41
LOC102724428A0A0B4J2F2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
LOC102724428A0A0B4J2F2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
LOC102724428A0A0B4J2F2 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC23.85■■□□□ 1.41
LOC102724428A0A0B4J2F2 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
LOC102724428A0A0B4J2F2 MOK-208ENST00000519058 917 ntTSL 2 BASIC23.85■■□□□ 1.41
LOC102724428A0A0B4J2F2 REEP1-209ENST00000541910 969 ntTSL 2 BASIC23.85■■□□□ 1.41
LOC102724428A0A0B4J2F2 AP001005.1-201ENST00000571755 1248 ntBASIC23.85■■□□□ 1.41
LOC102724428A0A0B4J2F2 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC23.85■■□□□ 1.41
LOC102724428A0A0B4J2F2 AC117500.6-201ENST00000624871 588 ntBASIC23.85■■□□□ 1.41
LOC102724428A0A0B4J2F2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
LOC102724428A0A0B4J2F2 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
LOC102724428A0A0B4J2F2 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC23.85■■□□□ 1.41
LOC102724428A0A0B4J2F2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
LOC102724428A0A0B4J2F2 LINC01006-201ENST00000333319 2292 ntBASIC23.85■■□□□ 1.41
LOC102724428A0A0B4J2F2 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms