Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC13.12□□□□□ -0.31
TRAV16A0A0A6YYK6 AC104771.1-201ENST00000603335 964 ntBASIC13.12□□□□□ -0.31
TRAV16A0A0A6YYK6 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV16A0A0A6YYK6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC13.12□□□□□ -0.31
TRAV16A0A0A6YYK6 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV16A0A0A6YYK6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV16A0A0A6YYK6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TRAV16A0A0A6YYK6 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV16A0A0A6YYK6 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC13.12□□□□□ -0.31
TRAV16A0A0A6YYK6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV16A0A0A6YYK6 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAV16A0A0A6YYK6 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAV16A0A0A6YYK6 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
TRAV16A0A0A6YYK6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV16A0A0A6YYK6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TRAV16A0A0A6YYK6 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TRAV16A0A0A6YYK6 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 AL161938.1-201ENST00000569833 2180 ntBASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 CRK-204ENST00000574295 1391 ntTSL 5 BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 HLA-L-209ENST00000420110 1011 ntBASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 PPP1R14BP2-201ENST00000426284 444 ntBASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 DUSP5P2-201ENST00000426873 1033 ntBASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 AC073210.2-201ENST00000430369 194 ntBASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 MARS-234ENST00000630571 216 ntTSL 5 BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 MARS-235ENST00000630803 183 ntTSL 3 BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 KRT8P20-201ENST00000423953 1409 ntBASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 AC012313.1-201ENST00000593393 3059 ntBASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 AC093525.10-201ENST00000625130 1569 ntBASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV16A0A0A6YYK6 GATB-213ENST00000515812 1893 ntTSL 5 BASIC13.1□□□□□ -0.31
TRAV16A0A0A6YYK6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV16A0A0A6YYK6 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAV16A0A0A6YYK6 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV16A0A0A6YYK6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV16A0A0A6YYK6 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV16A0A0A6YYK6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV16A0A0A6YYK6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAV16A0A0A6YYK6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC13.1□□□□□ -0.31
TRAV16A0A0A6YYK6 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV16A0A0A6YYK6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV16A0A0A6YYK6 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV16A0A0A6YYK6 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV16A0A0A6YYK6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
TRAV16A0A0A6YYK6 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV16A0A0A6YYK6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV16A0A0A6YYK6 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
TRAV16A0A0A6YYK6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAV16A0A0A6YYK6 AC069152.1-201ENST00000438030 544 ntBASIC13.1□□□□□ -0.31
TRAV16A0A0A6YYK6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
TRAV16A0A0A6YYK6 NME6-213ENST00000451657 871 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAV16A0A0A6YYK6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV16A0A0A6YYK6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV16A0A0A6YYK6 AC091874.3-201ENST00000512672 1195 ntBASIC13.1□□□□□ -0.31
TRAV16A0A0A6YYK6 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
TRAV16A0A0A6YYK6 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV16A0A0A6YYK6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
TRAV16A0A0A6YYK6 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TRAV16A0A0A6YYK6 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV16A0A0A6YYK6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV16A0A0A6YYK6 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms