Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 POU5F1P3-201ENST00000428824 1078 ntBASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 AL121829.2-201ENST00000620908 328 ntBASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC13.33□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC13.33□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC13.33□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC13.33□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC13.33□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 ADM-205ENST00000528544 586 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms