Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 MDFI-202ENST00000373050 809 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 NIFKP9-201ENST00000419265 221 ntBASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 REXO2-216ENST00000544196 452 ntTSL 3 BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 AC233702.5-201ENST00000584107 538 ntBASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 AC073195.1-201ENST00000607241 877 ntBASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 AL353708.3-201ENST00000610272 989 ntBASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 TREX1-205ENST00000625293 1783 ntBASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV26-1A0A087WT03 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 SAPCD2P4-201ENST00000424595 1171 ntBASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 KSR1P1-201ENST00000446298 240 ntBASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 CR392000.1-201ENST00000624770 1228 ntBASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 AL049637.2-201ENST00000641778 930 ntBASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAV26-1A0A087WT03 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV26-1A0A087WT03 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV26-1A0A087WT03 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV26-1A0A087WT03 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TRAV26-1A0A087WT03 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
TRAV26-1A0A087WT03 AC124067.4-201ENST00000519691 2379 ntBASIC13.6□□□□□ -0.23
TRAV26-1A0A087WT03 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV26-1A0A087WT03 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC13.6□□□□□ -0.23
TRAV26-1A0A087WT03 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms