Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC22.58■■□□□ 1.21
DDX49Q9Y6V7 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
DDX49Q9Y6V7 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
DDX49Q9Y6V7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
DDX49Q9Y6V7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
DDX49Q9Y6V7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC22.58■■□□□ 1.21
DDX49Q9Y6V7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC22.58■■□□□ 1.21
DDX49Q9Y6V7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
DDX49Q9Y6V7 PCDHB18P-201ENST00000524813 2368 ntBASIC22.58■■□□□ 1.21
DDX49Q9Y6V7 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC22.58■■□□□ 1.2
DDX49Q9Y6V7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
DDX49Q9Y6V7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
DDX49Q9Y6V7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
DDX49Q9Y6V7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
DDX49Q9Y6V7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
DDX49Q9Y6V7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC22.58■■□□□ 1.2
DDX49Q9Y6V7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
DDX49Q9Y6V7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
DDX49Q9Y6V7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
DDX49Q9Y6V7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
DDX49Q9Y6V7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
DDX49Q9Y6V7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC22.57■■□□□ 1.2
DDX49Q9Y6V7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
DDX49Q9Y6V7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC22.57■■□□□ 1.2
DDX49Q9Y6V7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC22.57■■□□□ 1.2
DDX49Q9Y6V7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
DDX49Q9Y6V7 FZD10-202ENST00000539839 3282 ntBASIC22.57■■□□□ 1.2
DDX49Q9Y6V7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
DDX49Q9Y6V7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC22.57■■□□□ 1.2
DDX49Q9Y6V7 AC090164.3-201ENST00000610780 2143 ntBASIC22.57■■□□□ 1.2
DDX49Q9Y6V7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
DDX49Q9Y6V7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC22.57■■□□□ 1.2
DDX49Q9Y6V7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
DDX49Q9Y6V7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
DDX49Q9Y6V7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC22.57■■□□□ 1.2
DDX49Q9Y6V7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
DDX49Q9Y6V7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC22.57■■□□□ 1.2
DDX49Q9Y6V7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
DDX49Q9Y6V7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC22.57■■□□□ 1.2
DDX49Q9Y6V7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
DDX49Q9Y6V7 REXO1L10P-201ENST00000615707 1290 ntBASIC22.57■■□□□ 1.2
DDX49Q9Y6V7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC22.57■■□□□ 1.2
DDX49Q9Y6V7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC22.57■■□□□ 1.2
DDX49Q9Y6V7 AC097493.4-201ENST00000641197 219 ntBASIC22.57■■□□□ 1.2
DDX49Q9Y6V7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
DDX49Q9Y6V7 WIZP1-201ENST00000531444 2299 ntBASIC22.57■■□□□ 1.2
DDX49Q9Y6V7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
DDX49Q9Y6V7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
DDX49Q9Y6V7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
DDX49Q9Y6V7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
DDX49Q9Y6V7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
DDX49Q9Y6V7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
DDX49Q9Y6V7 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
DDX49Q9Y6V7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
DDX49Q9Y6V7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
DDX49Q9Y6V7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
DDX49Q9Y6V7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
DDX49Q9Y6V7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC22.56■■□□□ 1.2
DDX49Q9Y6V7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
DDX49Q9Y6V7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
DDX49Q9Y6V7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
DDX49Q9Y6V7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
DDX49Q9Y6V7 AL390955.1-201ENST00000428694 934 ntBASIC22.56■■□□□ 1.2
DDX49Q9Y6V7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
DDX49Q9Y6V7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
DDX49Q9Y6V7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC22.56■■□□□ 1.2
DDX49Q9Y6V7 AC073195.1-201ENST00000607241 877 ntBASIC22.56■■□□□ 1.2
DDX49Q9Y6V7 AP000525.1-201ENST00000608286 694 ntBASIC22.56■■□□□ 1.2
DDX49Q9Y6V7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
DDX49Q9Y6V7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
DDX49Q9Y6V7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
DDX49Q9Y6V7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
DDX49Q9Y6V7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
DDX49Q9Y6V7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
DDX49Q9Y6V7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
DDX49Q9Y6V7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
DDX49Q9Y6V7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
DDX49Q9Y6V7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
DDX49Q9Y6V7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
DDX49Q9Y6V7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
DDX49Q9Y6V7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
DDX49Q9Y6V7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
DDX49Q9Y6V7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
DDX49Q9Y6V7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
DDX49Q9Y6V7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC22.55■■□□□ 1.2
DDX49Q9Y6V7 RBM17P1-201ENST00000453646 1190 ntBASIC22.55■■□□□ 1.2
DDX49Q9Y6V7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC22.55■■□□□ 1.2
DDX49Q9Y6V7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC22.55■■□□□ 1.2
DDX49Q9Y6V7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC22.55■■□□□ 1.2
DDX49Q9Y6V7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC22.55■■□□□ 1.2
DDX49Q9Y6V7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC22.55■■□□□ 1.2
DDX49Q9Y6V7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
DDX49Q9Y6V7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
DDX49Q9Y6V7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
DDX49Q9Y6V7 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
DDX49Q9Y6V7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC22.54■■□□□ 1.2
DDX49Q9Y6V7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
DDX49Q9Y6V7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
DDX49Q9Y6V7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
DDX49Q9Y6V7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms