Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.67■□□□□ 0.74
HCFC2Q9Y5Z7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.67■□□□□ 0.74
HCFC2Q9Y5Z7 GPALPP1-207ENST00000611650 899 ntBASIC19.67■□□□□ 0.74
HCFC2Q9Y5Z7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HCFC2Q9Y5Z7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HCFC2Q9Y5Z7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HCFC2Q9Y5Z7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.67■□□□□ 0.74
HCFC2Q9Y5Z7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HCFC2Q9Y5Z7 Z82202.1-201ENST00000623446 1880 ntBASIC19.67■□□□□ 0.74
HCFC2Q9Y5Z7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
HCFC2Q9Y5Z7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.66■□□□□ 0.74
HCFC2Q9Y5Z7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HCFC2Q9Y5Z7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HCFC2Q9Y5Z7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HCFC2Q9Y5Z7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
HCFC2Q9Y5Z7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.66■□□□□ 0.74
HCFC2Q9Y5Z7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.66■□□□□ 0.74
HCFC2Q9Y5Z7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HCFC2Q9Y5Z7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HCFC2Q9Y5Z7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HCFC2Q9Y5Z7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HCFC2Q9Y5Z7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HCFC2Q9Y5Z7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.66■□□□□ 0.74
HCFC2Q9Y5Z7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.66■□□□□ 0.74
HCFC2Q9Y5Z7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.66■□□□□ 0.74
HCFC2Q9Y5Z7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
HCFC2Q9Y5Z7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HCFC2Q9Y5Z7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.66■□□□□ 0.74
HCFC2Q9Y5Z7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.66■□□□□ 0.74
HCFC2Q9Y5Z7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.66■□□□□ 0.74
HCFC2Q9Y5Z7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.66■□□□□ 0.74
HCFC2Q9Y5Z7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.66■□□□□ 0.74
HCFC2Q9Y5Z7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.66■□□□□ 0.74
HCFC2Q9Y5Z7 AC006538.3-201ENST00000612495 578 ntBASIC19.66■□□□□ 0.74
HCFC2Q9Y5Z7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.66■□□□□ 0.74
HCFC2Q9Y5Z7 AC233702.3-201ENST00000578656 1387 ntBASIC19.66■□□□□ 0.74
HCFC2Q9Y5Z7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.66■□□□□ 0.74
HCFC2Q9Y5Z7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HCFC2Q9Y5Z7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HCFC2Q9Y5Z7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HCFC2Q9Y5Z7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HCFC2Q9Y5Z7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.65■□□□□ 0.74
HCFC2Q9Y5Z7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HCFC2Q9Y5Z7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HCFC2Q9Y5Z7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
HCFC2Q9Y5Z7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
HCFC2Q9Y5Z7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HCFC2Q9Y5Z7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.65■□□□□ 0.74
HCFC2Q9Y5Z7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HCFC2Q9Y5Z7 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HCFC2Q9Y5Z7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HCFC2Q9Y5Z7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.65■□□□□ 0.74
HCFC2Q9Y5Z7 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HCFC2Q9Y5Z7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HCFC2Q9Y5Z7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.65■□□□□ 0.74
HCFC2Q9Y5Z7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.65■□□□□ 0.74
HCFC2Q9Y5Z7 KRT16P4-201ENST00000453883 522 ntBASIC19.65■□□□□ 0.74
HCFC2Q9Y5Z7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.65■□□□□ 0.74
HCFC2Q9Y5Z7 AC079776.4-201ENST00000511039 504 ntBASIC19.65■□□□□ 0.74
HCFC2Q9Y5Z7 AL662844.1-201ENST00000546340 181 ntBASIC19.65■□□□□ 0.74
HCFC2Q9Y5Z7 AC099336.1-202ENST00000602961 463 ntBASIC19.65■□□□□ 0.74
HCFC2Q9Y5Z7 AL121912.1-201ENST00000603683 238 ntBASIC19.65■□□□□ 0.74
HCFC2Q9Y5Z7 AL353801.3-201ENST00000609898 542 ntBASIC19.65■□□□□ 0.74
HCFC2Q9Y5Z7 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.65■□□□□ 0.74
HCFC2Q9Y5Z7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
HCFC2Q9Y5Z7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HCFC2Q9Y5Z7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.65■□□□□ 0.74
HCFC2Q9Y5Z7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HCFC2Q9Y5Z7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HCFC2Q9Y5Z7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HCFC2Q9Y5Z7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HCFC2Q9Y5Z7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HCFC2Q9Y5Z7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HCFC2Q9Y5Z7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HCFC2Q9Y5Z7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.64■□□□□ 0.74
HCFC2Q9Y5Z7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HCFC2Q9Y5Z7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.64■□□□□ 0.74
HCFC2Q9Y5Z7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.64■□□□□ 0.74
HCFC2Q9Y5Z7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.74
HCFC2Q9Y5Z7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
HCFC2Q9Y5Z7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HCFC2Q9Y5Z7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HCFC2Q9Y5Z7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
HCFC2Q9Y5Z7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HCFC2Q9Y5Z7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.64■□□□□ 0.73
HCFC2Q9Y5Z7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HCFC2Q9Y5Z7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HCFC2Q9Y5Z7 MRPL3P1-201ENST00000400109 1033 ntBASIC19.64■□□□□ 0.73
HCFC2Q9Y5Z7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HCFC2Q9Y5Z7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.64■□□□□ 0.73
HCFC2Q9Y5Z7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.64■□□□□ 0.73
HCFC2Q9Y5Z7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.64■□□□□ 0.73
HCFC2Q9Y5Z7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.64■□□□□ 0.73
HCFC2Q9Y5Z7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.64■□□□□ 0.73
HCFC2Q9Y5Z7 Z69720.1-201ENST00000601483 472 ntBASIC19.64■□□□□ 0.73
HCFC2Q9Y5Z7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.64■□□□□ 0.73
HCFC2Q9Y5Z7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HCFC2Q9Y5Z7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.64■□□□□ 0.73
HCFC2Q9Y5Z7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
HCFC2Q9Y5Z7 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms