Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCN10AQ9Y5Y9 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCN10AQ9Y5Y9 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SCN10AQ9Y5Y9 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.61■□□□□ 0.89
SCN10AQ9Y5Y9 AC106795.1-205ENST00000512851 1056 ntBASIC20.61■□□□□ 0.89
SCN10AQ9Y5Y9 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SCN10AQ9Y5Y9 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
SCN10AQ9Y5Y9 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SCN10AQ9Y5Y9 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.61■□□□□ 0.89
SCN10AQ9Y5Y9 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SCN10AQ9Y5Y9 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCN10AQ9Y5Y9 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SCN10AQ9Y5Y9 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCN10AQ9Y5Y9 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
SCN10AQ9Y5Y9 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCN10AQ9Y5Y9 AP003733.1-201ENST00000491725 852 ntBASIC20.61■□□□□ 0.89
SCN10AQ9Y5Y9 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.61■□□□□ 0.89
SCN10AQ9Y5Y9 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.61■□□□□ 0.89
SCN10AQ9Y5Y9 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.61■□□□□ 0.89
SCN10AQ9Y5Y9 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SCN10AQ9Y5Y9 AL671883.3-201ENST00000603274 991 ntBASIC20.61■□□□□ 0.89
SCN10AQ9Y5Y9 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.61■□□□□ 0.89
SCN10AQ9Y5Y9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.61■□□□□ 0.89
SCN10AQ9Y5Y9 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCN10AQ9Y5Y9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCN10AQ9Y5Y9 FP475955.4-201ENST00000623131 1990 ntBASIC20.6■□□□□ 0.89
SCN10AQ9Y5Y9 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.6■□□□□ 0.89
SCN10AQ9Y5Y9 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCN10AQ9Y5Y9 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SCN10AQ9Y5Y9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SCN10AQ9Y5Y9 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCN10AQ9Y5Y9 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCN10AQ9Y5Y9 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCN10AQ9Y5Y9 FOSL1P1-201ENST00000511041 816 ntBASIC20.6■□□□□ 0.89
SCN10AQ9Y5Y9 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SCN10AQ9Y5Y9 AC090616.6-201ENST00000582640 721 ntBASIC20.6■□□□□ 0.89
SCN10AQ9Y5Y9 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCN10AQ9Y5Y9 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCN10AQ9Y5Y9 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.6■□□□□ 0.89
SCN10AQ9Y5Y9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.6■□□□□ 0.89
SCN10AQ9Y5Y9 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.6■□□□□ 0.89
SCN10AQ9Y5Y9 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SCN10AQ9Y5Y9 AC091607.1-201ENST00000490318 1060 ntBASIC20.59■□□□□ 0.89
SCN10AQ9Y5Y9 KRT18P41-201ENST00000518924 1277 ntBASIC20.59■□□□□ 0.89
SCN10AQ9Y5Y9 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.59■□□□□ 0.89
SCN10AQ9Y5Y9 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.59■□□□□ 0.89
SCN10AQ9Y5Y9 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCN10AQ9Y5Y9 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
SCN10AQ9Y5Y9 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.59■□□□□ 0.89
SCN10AQ9Y5Y9 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCN10AQ9Y5Y9 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.59■□□□□ 0.89
SCN10AQ9Y5Y9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCN10AQ9Y5Y9 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCN10AQ9Y5Y9 IGHV3-47-201ENST00000425060 335 ntBASIC20.59■□□□□ 0.89
SCN10AQ9Y5Y9 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.59■□□□□ 0.89
SCN10AQ9Y5Y9 MTMR9LP-203ENST00000426597 1545 ntBASIC20.59■□□□□ 0.89
SCN10AQ9Y5Y9 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.59■□□□□ 0.89
SCN10AQ9Y5Y9 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.59■□□□□ 0.89
SCN10AQ9Y5Y9 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SCN10AQ9Y5Y9 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCN10AQ9Y5Y9 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SCN10AQ9Y5Y9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.58■□□□□ 0.89
SCN10AQ9Y5Y9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.58■□□□□ 0.89
SCN10AQ9Y5Y9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
SCN10AQ9Y5Y9 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCN10AQ9Y5Y9 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCN10AQ9Y5Y9 KRT16P4-201ENST00000453883 522 ntBASIC20.58■□□□□ 0.89
SCN10AQ9Y5Y9 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SCN10AQ9Y5Y9 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.58■□□□□ 0.89
SCN10AQ9Y5Y9 AP005901.3-202ENST00000581653 237 ntBASIC20.58■□□□□ 0.89
SCN10AQ9Y5Y9 Z69720.1-201ENST00000601483 472 ntBASIC20.58■□□□□ 0.89
SCN10AQ9Y5Y9 AC024563.2-201ENST00000603282 481 ntBASIC20.58■□□□□ 0.89
SCN10AQ9Y5Y9 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCN10AQ9Y5Y9 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.58■□□□□ 0.89
SCN10AQ9Y5Y9 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCN10AQ9Y5Y9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SCN10AQ9Y5Y9 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCN10AQ9Y5Y9 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.58■□□□□ 0.89
SCN10AQ9Y5Y9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SCN10AQ9Y5Y9 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SCN10AQ9Y5Y9 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SCN10AQ9Y5Y9 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.58■□□□□ 0.88
SCN10AQ9Y5Y9 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.88
SCN10AQ9Y5Y9 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SCN10AQ9Y5Y9 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCN10AQ9Y5Y9 AKR1C7P-201ENST00000305623 895 ntBASIC20.57■□□□□ 0.88
SCN10AQ9Y5Y9 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCN10AQ9Y5Y9 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCN10AQ9Y5Y9 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.57■□□□□ 0.88
SCN10AQ9Y5Y9 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SCN10AQ9Y5Y9 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.57■□□□□ 0.88
SCN10AQ9Y5Y9 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SCN10AQ9Y5Y9 AL121772.3-201ENST00000610840 674 ntBASIC20.57■□□□□ 0.88
SCN10AQ9Y5Y9 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.57■□□□□ 0.88
SCN10AQ9Y5Y9 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.57■□□□□ 0.88
SCN10AQ9Y5Y9 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.57■□□□□ 0.88
SCN10AQ9Y5Y9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.57■□□□□ 0.88
SCN10AQ9Y5Y9 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCN10AQ9Y5Y9 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.57■□□□□ 0.88
SCN10AQ9Y5Y9 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms