Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB1Q9Y5F3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PCDHB1Q9Y5F3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB1Q9Y5F3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PCDHB1Q9Y5F3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PCDHB1Q9Y5F3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
PCDHB1Q9Y5F3 AC117947.1-201ENST00000427448 529 ntBASIC18.82■□□□□ 0.6
PCDHB1Q9Y5F3 BX664615.1-201ENST00000443558 458 ntBASIC18.82■□□□□ 0.6
PCDHB1Q9Y5F3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDHB1Q9Y5F3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHB1Q9Y5F3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHB1Q9Y5F3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHB1Q9Y5F3 SLC25A1P4-201ENST00000567977 778 ntBASIC18.82■□□□□ 0.6
PCDHB1Q9Y5F3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
PCDHB1Q9Y5F3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB1Q9Y5F3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PCDHB1Q9Y5F3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB1Q9Y5F3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHB1Q9Y5F3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHB1Q9Y5F3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB1Q9Y5F3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB1Q9Y5F3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB1Q9Y5F3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
PCDHB1Q9Y5F3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB1Q9Y5F3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PCDHB1Q9Y5F3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB1Q9Y5F3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB1Q9Y5F3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB1Q9Y5F3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PCDHB1Q9Y5F3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB1Q9Y5F3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.81■□□□□ 0.6
PCDHB1Q9Y5F3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB1Q9Y5F3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB1Q9Y5F3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB1Q9Y5F3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB1Q9Y5F3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PCDHB1Q9Y5F3 AC063952.2-201ENST00000498792 1227 ntBASIC18.81■□□□□ 0.6
PCDHB1Q9Y5F3 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDHB1Q9Y5F3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHB1Q9Y5F3 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDHB1Q9Y5F3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB1Q9Y5F3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB1Q9Y5F3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB1Q9Y5F3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB1Q9Y5F3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB1Q9Y5F3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB1Q9Y5F3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB1Q9Y5F3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB1Q9Y5F3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PCDHB1Q9Y5F3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB1Q9Y5F3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
PCDHB1Q9Y5F3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB1Q9Y5F3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHB1Q9Y5F3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB1Q9Y5F3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHB1Q9Y5F3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB1Q9Y5F3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB1Q9Y5F3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHB1Q9Y5F3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB1Q9Y5F3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB1Q9Y5F3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB1Q9Y5F3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB1Q9Y5F3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB1Q9Y5F3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB1Q9Y5F3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHB1Q9Y5F3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB1Q9Y5F3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHB1Q9Y5F3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHB1Q9Y5F3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHB1Q9Y5F3 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDHB1Q9Y5F3 AC130371.2-201ENST00000619443 611 ntBASIC18.8■□□□□ 0.6
PCDHB1Q9Y5F3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB1Q9Y5F3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB1Q9Y5F3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB1Q9Y5F3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDHB1Q9Y5F3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB1Q9Y5F3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDHB1Q9Y5F3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB1Q9Y5F3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PCDHB1Q9Y5F3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHB1Q9Y5F3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB1Q9Y5F3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB1Q9Y5F3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB1Q9Y5F3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB1Q9Y5F3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB1Q9Y5F3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB1Q9Y5F3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB1Q9Y5F3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHB1Q9Y5F3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB1Q9Y5F3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB1Q9Y5F3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB1Q9Y5F3 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHB1Q9Y5F3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB1Q9Y5F3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHB1Q9Y5F3 FAM207BP-201ENST00000447172 505 ntBASIC18.79■□□□□ 0.6
PCDHB1Q9Y5F3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB1Q9Y5F3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB1Q9Y5F3 AC139887.4-201ENST00000607877 719 ntBASIC18.79■□□□□ 0.6
PCDHB1Q9Y5F3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB1Q9Y5F3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms