Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB3Q9Y5E6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB3Q9Y5E6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB3Q9Y5E6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB3Q9Y5E6 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PCDHB3Q9Y5E6 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.42■□□□□ 0.54
PCDHB3Q9Y5E6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB3Q9Y5E6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB3Q9Y5E6 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB3Q9Y5E6 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PCDHB3Q9Y5E6 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB3Q9Y5E6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB3Q9Y5E6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB3Q9Y5E6 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB3Q9Y5E6 AC006333.2-201ENST00000607957 2099 ntBASIC18.42■□□□□ 0.54
PCDHB3Q9Y5E6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.42■□□□□ 0.54
PCDHB3Q9Y5E6 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB3Q9Y5E6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB3Q9Y5E6 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
PCDHB3Q9Y5E6 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
PCDHB3Q9Y5E6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHB3Q9Y5E6 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.42■□□□□ 0.54
PCDHB3Q9Y5E6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHB3Q9Y5E6 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB3Q9Y5E6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB3Q9Y5E6 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHB3Q9Y5E6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHB3Q9Y5E6 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB3Q9Y5E6 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB3Q9Y5E6 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PCDHB3Q9Y5E6 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHB3Q9Y5E6 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB3Q9Y5E6 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB3Q9Y5E6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
PCDHB3Q9Y5E6 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
PCDHB3Q9Y5E6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB3Q9Y5E6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB3Q9Y5E6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PCDHB3Q9Y5E6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB3Q9Y5E6 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHB3Q9Y5E6 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB3Q9Y5E6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB3Q9Y5E6 CRYGFP-201ENST00000418459 633 ntBASIC18.41■□□□□ 0.54
PCDHB3Q9Y5E6 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PCDHB3Q9Y5E6 Z85996.1-201ENST00000494644 937 ntBASIC18.41■□□□□ 0.54
PCDHB3Q9Y5E6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDHB3Q9Y5E6 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PCDHB3Q9Y5E6 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PCDHB3Q9Y5E6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB3Q9Y5E6 AC141586.3-201ENST00000562166 1838 ntBASIC18.41■□□□□ 0.54
PCDHB3Q9Y5E6 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB3Q9Y5E6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHB3Q9Y5E6 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB3Q9Y5E6 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
PCDHB3Q9Y5E6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB3Q9Y5E6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
PCDHB3Q9Y5E6 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB3Q9Y5E6 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB3Q9Y5E6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PCDHB3Q9Y5E6 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
PCDHB3Q9Y5E6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.4■□□□□ 0.54
PCDHB3Q9Y5E6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB3Q9Y5E6 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.4■□□□□ 0.54
PCDHB3Q9Y5E6 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB3Q9Y5E6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB3Q9Y5E6 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB3Q9Y5E6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHB3Q9Y5E6 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB3Q9Y5E6 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHB3Q9Y5E6 TSPY14P-201ENST00000303979 915 ntBASIC18.4■□□□□ 0.54
PCDHB3Q9Y5E6 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB3Q9Y5E6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
PCDHB3Q9Y5E6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHB3Q9Y5E6 FAM207BP-201ENST00000447172 505 ntBASIC18.4■□□□□ 0.54
PCDHB3Q9Y5E6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHB3Q9Y5E6 EGLN1P1-201ENST00000531623 762 ntBASIC18.4■□□□□ 0.54
PCDHB3Q9Y5E6 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.4■□□□□ 0.54
PCDHB3Q9Y5E6 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB3Q9Y5E6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHB3Q9Y5E6 AL160286.2-201ENST00000567150 934 ntBASIC18.4■□□□□ 0.54
PCDHB3Q9Y5E6 SLC25A1P4-201ENST00000567977 778 ntBASIC18.4■□□□□ 0.54
PCDHB3Q9Y5E6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
PCDHB3Q9Y5E6 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHB3Q9Y5E6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB3Q9Y5E6 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB3Q9Y5E6 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB3Q9Y5E6 AL049812.1-201ENST00000432563 2267 ntBASIC18.4■□□□□ 0.54
PCDHB3Q9Y5E6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB3Q9Y5E6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PCDHB3Q9Y5E6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PCDHB3Q9Y5E6 AC096733.2-201ENST00000609937 1394 ntBASIC18.4■□□□□ 0.54
PCDHB3Q9Y5E6 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB3Q9Y5E6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
PCDHB3Q9Y5E6 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHB3Q9Y5E6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
PCDHB3Q9Y5E6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PCDHB3Q9Y5E6 AC007613.1-201ENST00000572811 2597 ntBASIC18.39■□□□□ 0.54
PCDHB3Q9Y5E6 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.39■□□□□ 0.54
PCDHB3Q9Y5E6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
PCDHB3Q9Y5E6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms