Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 CLEC4GP1-201ENST00000596555 870 ntBASIC19.66■□□□□ 0.74
YIPF1Q9Y548 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
YIPF1Q9Y548 KRT8P7-201ENST00000533003 1432 ntBASIC19.66■□□□□ 0.74
YIPF1Q9Y548 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
YIPF1Q9Y548 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
YIPF1Q9Y548 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
YIPF1Q9Y548 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
YIPF1Q9Y548 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.65■□□□□ 0.74
YIPF1Q9Y548 AFG3L1P-217ENST00000557444 2447 ntBASIC19.65■□□□□ 0.74
YIPF1Q9Y548 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
YIPF1Q9Y548 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.65■□□□□ 0.74
YIPF1Q9Y548 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
YIPF1Q9Y548 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.65■□□□□ 0.74
YIPF1Q9Y548 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.65■□□□□ 0.74
YIPF1Q9Y548 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
YIPF1Q9Y548 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
YIPF1Q9Y548 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.65■□□□□ 0.74
YIPF1Q9Y548 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.65■□□□□ 0.74
YIPF1Q9Y548 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
YIPF1Q9Y548 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.65■□□□□ 0.74
YIPF1Q9Y548 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.65■□□□□ 0.74
YIPF1Q9Y548 AC011498.5-201ENST00000592027 486 ntBASIC19.65■□□□□ 0.74
YIPF1Q9Y548 AC010240.3-201ENST00000607688 395 ntBASIC19.65■□□□□ 0.74
YIPF1Q9Y548 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
YIPF1Q9Y548 NPAP1P7-201ENST00000613027 823 ntBASIC19.65■□□□□ 0.74
YIPF1Q9Y548 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.65■□□□□ 0.74
YIPF1Q9Y548 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
YIPF1Q9Y548 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
YIPF1Q9Y548 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
YIPF1Q9Y548 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.65■□□□□ 0.74
YIPF1Q9Y548 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
YIPF1Q9Y548 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
YIPF1Q9Y548 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
YIPF1Q9Y548 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
YIPF1Q9Y548 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.64■□□□□ 0.74
YIPF1Q9Y548 AL391807.1-203ENST00000604392 2365 ntBASIC19.64■□□□□ 0.74
YIPF1Q9Y548 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.64■□□□□ 0.73
YIPF1Q9Y548 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
YIPF1Q9Y548 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
YIPF1Q9Y548 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.64■□□□□ 0.73
YIPF1Q9Y548 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
YIPF1Q9Y548 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
YIPF1Q9Y548 AC104390.1-201ENST00000555663 520 ntBASIC19.64■□□□□ 0.73
YIPF1Q9Y548 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
YIPF1Q9Y548 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.64■□□□□ 0.73
YIPF1Q9Y548 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.64■□□□□ 0.73
YIPF1Q9Y548 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
YIPF1Q9Y548 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.64■□□□□ 0.73
YIPF1Q9Y548 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
YIPF1Q9Y548 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
YIPF1Q9Y548 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
YIPF1Q9Y548 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
YIPF1Q9Y548 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.63■□□□□ 0.73
YIPF1Q9Y548 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
YIPF1Q9Y548 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
YIPF1Q9Y548 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
YIPF1Q9Y548 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
YIPF1Q9Y548 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
YIPF1Q9Y548 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
YIPF1Q9Y548 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
YIPF1Q9Y548 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.63■□□□□ 0.73
YIPF1Q9Y548 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.63■□□□□ 0.73
YIPF1Q9Y548 AL162741.1-201ENST00000565563 1558 ntBASIC19.63■□□□□ 0.73
YIPF1Q9Y548 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.63■□□□□ 0.73
YIPF1Q9Y548 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.63■□□□□ 0.73
YIPF1Q9Y548 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.63■□□□□ 0.73
YIPF1Q9Y548 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
YIPF1Q9Y548 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
YIPF1Q9Y548 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
YIPF1Q9Y548 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
YIPF1Q9Y548 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
YIPF1Q9Y548 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
YIPF1Q9Y548 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.63■□□□□ 0.73
YIPF1Q9Y548 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.63■□□□□ 0.73
YIPF1Q9Y548 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.63■□□□□ 0.73
YIPF1Q9Y548 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
YIPF1Q9Y548 AC092119.3-201ENST00000612618 583 ntBASIC19.63■□□□□ 0.73
YIPF1Q9Y548 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.63■□□□□ 0.73
YIPF1Q9Y548 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
YIPF1Q9Y548 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
YIPF1Q9Y548 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
YIPF1Q9Y548 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
YIPF1Q9Y548 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
YIPF1Q9Y548 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.62■□□□□ 0.73
YIPF1Q9Y548 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
YIPF1Q9Y548 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.62■□□□□ 0.73
YIPF1Q9Y548 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
YIPF1Q9Y548 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
YIPF1Q9Y548 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
YIPF1Q9Y548 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.62■□□□□ 0.73
YIPF1Q9Y548 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.62■□□□□ 0.73
YIPF1Q9Y548 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
YIPF1Q9Y548 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
YIPF1Q9Y548 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
YIPF1Q9Y548 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.62■□□□□ 0.73
YIPF1Q9Y548 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.62■□□□□ 0.73
YIPF1Q9Y548 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.62■□□□□ 0.73
YIPF1Q9Y548 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.62■□□□□ 0.73
YIPF1Q9Y548 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.62■□□□□ 0.73
YIPF1Q9Y548 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms