Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 IRX1P1-201ENST00000438849 1838 ntBASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 AC097381.1-201ENST00000429019 1296 ntBASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CHTOPQ9Y3Y2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHTOPQ9Y3Y2 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CHTOPQ9Y3Y2 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CHTOPQ9Y3Y2 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHTOPQ9Y3Y2 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.5□□□□□ -0.25
CHTOPQ9Y3Y2 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC13.5□□□□□ -0.25
CHTOPQ9Y3Y2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHTOPQ9Y3Y2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHTOPQ9Y3Y2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHTOPQ9Y3Y2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC13.5□□□□□ -0.25
CHTOPQ9Y3Y2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CHTOPQ9Y3Y2 CDV3P1-201ENST00000471403 739 ntBASIC13.5□□□□□ -0.25
CHTOPQ9Y3Y2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC13.5□□□□□ -0.25
CHTOPQ9Y3Y2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC13.5□□□□□ -0.25
CHTOPQ9Y3Y2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHTOPQ9Y3Y2 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
CHTOPQ9Y3Y2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CHTOPQ9Y3Y2 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CHTOPQ9Y3Y2 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHTOPQ9Y3Y2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHTOPQ9Y3Y2 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHTOPQ9Y3Y2 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHTOPQ9Y3Y2 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHTOPQ9Y3Y2 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CHTOPQ9Y3Y2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHTOPQ9Y3Y2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC13.5□□□□□ -0.25
CHTOPQ9Y3Y2 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 AC087633.2-202ENST00000565166 1439 ntBASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 TSPY26P-201ENST00000476365 1326 ntBASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 AC010141.2-201ENST00000452426 721 ntBASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 AC079140.4-201ENST00000507448 529 ntBASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 SRR-208ENST00000576848 588 ntTSL 4 BASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 MIR4767-201ENST00000582827 78 ntBASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC13.49□□□□□ -0.25
CHTOPQ9Y3Y2 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms